(12 nodes) Nonfunctional rRNA decay network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9WWI3_ZYMTI	RNase_PH domain-containing protein. (202 aa)
	F9WXI7_ZYMTI	eRF1_1 domain-containing protein. (556 aa)
	F9WXU1_ZYMTI	RNase_PH domain-containing protein. (250 aa)
	F9X0R8_ZYMTI	S1 motif domain-containing protein; Belongs to the RNR ribonuclease family. (993 aa)
	F9X1B2_ZYMTI	RNase_PH domain-containing protein. (354 aa)
	F9X5H7_ZYMTI	Uncharacterized protein. (292 aa)
	PATPB2401	26S proteasome regulatory complex, ATPase RPT6; Belongs to the AAA ATPase family. (389 aa)
	F9X703_ZYMTI	Uncharacterized protein. (267 aa)
	F9X852_ZYMTI	RNase_PH domain-containing protein. (331 aa)
	F9XH55_ZYMTI	Uncharacterized protein. (360 aa)
	F9XKM0_ZYMTI	Uncharacterized protein. (1315 aa)
	F9XML9_ZYMTI	HRDC domain-containing protein. (796 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F9WWI3_ZYMTI	F9WXU1_ZYMTI	F9WWI3	F9WXU1	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9WWI3_ZYMTI	F9X0R8_ZYMTI	F9WWI3	F9X0R8	RNase_PH domain-containing protein.	S1 motif domain-containing protein; Belongs to the RNR ribonuclease family.	0.998
F9WWI3_ZYMTI	F9X1B2_ZYMTI	F9WWI3	F9X1B2	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.998
F9WWI3_ZYMTI	F9X5H7_ZYMTI	F9WWI3	F9X5H7	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
F9WWI3_ZYMTI	F9X852_ZYMTI	F9WWI3	F9X852	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9WXU1_ZYMTI	F9WWI3_ZYMTI	F9WXU1	F9WWI3	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9WXU1_ZYMTI	F9X0R8_ZYMTI	F9WXU1	F9X0R8	RNase_PH domain-containing protein.	S1 motif domain-containing protein; Belongs to the RNR ribonuclease family.	0.998
F9WXU1_ZYMTI	F9X1B2_ZYMTI	F9WXU1	F9X1B2	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9WXU1_ZYMTI	F9X5H7_ZYMTI	F9WXU1	F9X5H7	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
F9WXU1_ZYMTI	F9X852_ZYMTI	F9WXU1	F9X852	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9X0R8_ZYMTI	F9WWI3_ZYMTI	F9X0R8	F9WWI3	S1 motif domain-containing protein; Belongs to the RNR ribonuclease family.	RNase_PH domain-containing protein.	0.998
F9X0R8_ZYMTI	F9WXU1_ZYMTI	F9X0R8	F9WXU1	S1 motif domain-containing protein; Belongs to the RNR ribonuclease family.	RNase_PH domain-containing protein.	0.998
F9X0R8_ZYMTI	F9X1B2_ZYMTI	F9X0R8	F9X1B2	S1 motif domain-containing protein; Belongs to the RNR ribonuclease family.	RNase_PH domain-containing protein.	0.998
F9X0R8_ZYMTI	F9X5H7_ZYMTI	F9X0R8	F9X5H7	S1 motif domain-containing protein; Belongs to the RNR ribonuclease family.	Uncharacterized protein.	0.998
F9X0R8_ZYMTI	F9X852_ZYMTI	F9X0R8	F9X852	S1 motif domain-containing protein; Belongs to the RNR ribonuclease family.	RNase_PH domain-containing protein.	0.998
F9X0R8_ZYMTI	F9XML9_ZYMTI	F9X0R8	F9XML9	S1 motif domain-containing protein; Belongs to the RNR ribonuclease family.	HRDC domain-containing protein.	0.982
F9X1B2_ZYMTI	F9WWI3_ZYMTI	F9X1B2	F9WWI3	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.998
F9X1B2_ZYMTI	F9WXU1_ZYMTI	F9X1B2	F9WXU1	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
F9X1B2_ZYMTI	F9X0R8_ZYMTI	F9X1B2	F9X0R8	RNase_PH domain-containing protein.	S1 motif domain-containing protein; Belongs to the RNR ribonuclease family.	0.998
F9X1B2_ZYMTI	F9X5H7_ZYMTI	F9X1B2	F9X5H7	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999