(84 nodes) Armadillo-like helical network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9X2T9_ZYMTI	PUM-HD domain-containing protein. (432 aa)
	F9XGF5_ZYMTI	Adaptin_N domain-containing protein. (984 aa)
	F9XG34_ZYMTI	Uncharacterized protein. (1603 aa)
	F9XEJ9_ZYMTI	RING-type domain-containing protein. (1577 aa)
	F9XDU9_ZYMTI	DRIM domain-containing protein. (2527 aa)
	CPD2401	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1191 aa)
	F9XDS9_ZYMTI	Uncharacterized protein. (387 aa)
	F9XDJ8_ZYMTI	Uncharacterized protein. (2646 aa)
	F9XDH5_ZYMTI	Uncharacterized protein. (891 aa)
	F9XDD0_ZYMTI	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (737 aa)
	F9XCB7_ZYMTI	Importin N-terminal domain-containing protein. (978 aa)
	F9XBT4_ZYMTI	SF3b1 domain-containing protein. (1190 aa)
	F9XBN0_ZYMTI	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1137 aa)
	F9XBD6_ZYMTI	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (699 aa)
	F9XAR7_ZYMTI	ABC transporter domain-containing protein. (1120 aa)
	F9X9M4_ZYMTI	Importin N-terminal domain-containing protein. (1104 aa)
	MgPP2AregA	MgPP2AregA, protein phosphatase 2A regulatory alpha sub-unit. (621 aa)
	F9X810_ZYMTI	Uncharacterized protein. (1369 aa)
	F9X7J9_ZYMTI	Importin N-terminal domain-containing protein. (1052 aa)
	F9X7G6_ZYMTI	Uncharacterized protein. (780 aa)
	F9X789_ZYMTI	Drf_GBD domain-containing protein. (864 aa)
	F9X6B2_ZYMTI	Uncharacterized protein. (898 aa)
	F9X5N7_ZYMTI	Uncharacterized protein. (1114 aa)
	F9X5L0_ZYMTI	Uncharacterized protein. (597 aa)
	F9X5I9_ZYMTI	Uncharacterized protein. (1014 aa)
	F9X5G1_ZYMTI	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (928 aa)
	F9X4N5_ZYMTI	Pumilio-related RNA binding protein. (1060 aa)
	F9X4N1_ZYMTI	Importin N-terminal domain-containing protein. (963 aa)
	F9X4K2_ZYMTI	PUM-HD domain-containing protein. (277 aa)
	F9X432_ZYMTI	Importin N-terminal domain-containing protein. (888 aa)
	F9X3Q9_ZYMTI	Uncharacterized protein. (395 aa)
	F9X330_ZYMTI	SCD domain-containing protein. (1142 aa)
	F9XH42_ZYMTI	WAPL domain-containing protein. (988 aa)
	TOR1	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2427 aa)
	F9X2H4_ZYMTI	ABC transporter domain-containing protein. (1064 aa)
	F9X2B4_ZYMTI	BP28CT domain-containing protein. (1780 aa)
	F9X1T5_ZYMTI	TIP120 domain-containing protein. (1320 aa)
	F9X1S2_ZYMTI	Importin subunit alpha; Belongs to the importin alpha family. (552 aa)
	F9X1I9_ZYMTI	Uncharacterized protein. (378 aa)
	F9X187_ZYMTI	Uncharacterized protein. (954 aa)
	F9X173_ZYMTI	HECT domain-containing protein. (1836 aa)
	F9X152_ZYMTI	AP-1 complex subunit gamma. (832 aa)
	F9X0V6_ZYMTI	Atx10homo_assoc domain-containing protein. (1046 aa)
	F9X0U2_ZYMTI	DUF3453 domain-containing protein. (729 aa)
	F9X0Q9_ZYMTI	PUM-HD domain-containing protein. (703 aa)
	F9X0G2_ZYMTI	Protein kinase domain-containing protein. (898 aa)
	F9WZT1_ZYMTI	Uncharacterized protein. (970 aa)
	F9WZ57_ZYMTI	SNF2 family DNA-dependent ATPase domain-containing protein. (1901 aa)
	F9WYT0_ZYMTI	Importin N-terminal domain-containing protein. (1048 aa)
	F9WYD0_ZYMTI	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (962 aa)
	F9WY44_ZYMTI	NUC173 domain-containing protein. (1236 aa)
	F9WY22_ZYMTI	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1021 aa)
	F9WXV1_ZYMTI	IFRD domain-containing protein. (509 aa)
	F9WX67_ZYMTI	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. (484 aa)
	F9WWX9_ZYMTI	CBF domain-containing protein. (845 aa)
	F9WWR9_ZYMTI	ELMO domain-containing protein. (711 aa)
	F9XQ68_ZYMTI	WD_REPEATS_REGION domain-containing protein. (1406 aa)
	F9XPX7_ZYMTI	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (929 aa)
	F9XPE2_ZYMTI	Protein kinase domain-containing protein. (749 aa)
	F9XPC5_ZYMTI	Protein kinase domain-containing protein. (1305 aa)
	F9XP67_ZYMTI	Importin N-terminal domain-containing protein. (1153 aa)
	F9XN14_ZYMTI	Importin N-terminal domain-containing protein. (1103 aa)
	MgMsn5	Importin N-terminal domain-containing protein. (1272 aa)
	F9XM96_ZYMTI	Uncharacterized protein. (1929 aa)
	F9XM27_ZYMTI	Uncharacterized protein. (1221 aa)
	FUS1	FUS1 actin binding activity. (1737 aa)
	F9XLT9_ZYMTI	Importin N-terminal domain-containing protein. (936 aa)
	F9XLG8_ZYMTI	Uncharacterized protein. (2037 aa)
	F9XLG5_ZYMTI	Uncharacterized protein. (926 aa)
	F9XL87_ZYMTI	Uncharacterized protein. (577 aa)
	F9XL77_ZYMTI	Uncharacterized protein. (1123 aa)
	F9XL44_ZYMTI	Fes1 domain-containing protein. (215 aa)
	F9XK14_ZYMTI	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (917 aa)
	F9XJM9_ZYMTI	DUF1716 domain-containing protein. (586 aa)
	F9XJH5_ZYMTI	Importin N-terminal domain-containing protein. (1029 aa)
	F9XJG3_ZYMTI	Adaptin_N domain-containing protein. (786 aa)
	F9XJF7_ZYMTI	TFCD_C domain-containing protein. (1181 aa)
	F9XJC1_ZYMTI	UNC45-central domain-containing protein. (810 aa)
	F9XJ67_ZYMTI	Protein kinase WD40. (1542 aa)
	LIA1	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor. (330 aa)
	F9XJ36_ZYMTI	Sister chromatid cohesion protein. (1695 aa)
	CPG2401	Chromosome condensation complex Condensin, subunit G. (1094 aa)
	PP2Aregb2	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (697 aa)
	F9XI59_ZYMTI	Uncharacterized protein. (1011 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPD2401	CPG2401	F9XDT2	F9XIM3	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Chromosome condensation complex Condensin, subunit G.	0.999
CPD2401	F9X6B2_ZYMTI	F9XDT2	F9X6B2	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Uncharacterized protein.	0.555
CPG2401	CPD2401	F9XIM3	F9XDT2	Chromosome condensation complex Condensin, subunit G.	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	0.999
CPG2401	F9X330_ZYMTI	F9XIM3	F9X330	Chromosome condensation complex Condensin, subunit G.	SCD domain-containing protein.	0.502
CPG2401	MgPP2AregA	F9XIM3	F9X8V9	Chromosome condensation complex Condensin, subunit G.	MgPP2AregA, protein phosphatase 2A regulatory alpha sub-unit.	0.593
F9WWX9_ZYMTI	F9WY44_ZYMTI	F9WWX9	F9WY44	CBF domain-containing protein.	NUC173 domain-containing protein.	0.934
F9WWX9_ZYMTI	F9X0Q9_ZYMTI	F9WWX9	F9X0Q9	CBF domain-containing protein.	PUM-HD domain-containing protein.	0.950
F9WWX9_ZYMTI	F9X2B4_ZYMTI	F9WWX9	F9X2B4	CBF domain-containing protein.	BP28CT domain-containing protein.	0.889
F9WWX9_ZYMTI	F9X2H4_ZYMTI	F9WWX9	F9X2H4	CBF domain-containing protein.	ABC transporter domain-containing protein.	0.819
F9WWX9_ZYMTI	F9X3Q9_ZYMTI	F9WWX9	F9X3Q9	CBF domain-containing protein.	Uncharacterized protein.	0.472
F9WWX9_ZYMTI	F9X7J9_ZYMTI	F9WWX9	F9X7J9	CBF domain-containing protein.	Importin N-terminal domain-containing protein.	0.407
F9WWX9_ZYMTI	F9X9M4_ZYMTI	F9WWX9	F9X9M4	CBF domain-containing protein.	Importin N-terminal domain-containing protein.	0.462
F9WWX9_ZYMTI	F9XAR7_ZYMTI	F9WWX9	F9XAR7	CBF domain-containing protein.	ABC transporter domain-containing protein.	0.964
F9WWX9_ZYMTI	F9XDJ8_ZYMTI	F9WWX9	F9XDJ8	CBF domain-containing protein.	Uncharacterized protein.	0.553
F9WWX9_ZYMTI	F9XDU9_ZYMTI	F9WWX9	F9XDU9	CBF domain-containing protein.	DRIM domain-containing protein.	0.960
F9WX67_ZYMTI	F9XH42_ZYMTI	F9WX67	F9XH42	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.	WAPL domain-containing protein.	0.602
F9WX67_ZYMTI	TOR1	F9WX67	F9X2M9	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.635
F9WXV1_ZYMTI	F9X173_ZYMTI	F9WXV1	F9X173	IFRD domain-containing protein.	HECT domain-containing protein.	0.534
F9WXV1_ZYMTI	F9XL44_ZYMTI	F9WXV1	F9XL44	IFRD domain-containing protein.	Fes1 domain-containing protein.	0.454
F9WY22_ZYMTI	F9X1S2_ZYMTI	F9WY22	F9X1S2	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Importin subunit alpha; Belongs to the importin alpha family.	0.551