(55 nodes) Winged helix DNA-binding domain superfamily network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9WWX1_ZYMTI	HTH La-type RNA-binding domain-containing protein. (1169 aa)
	F9WW92_ZYMTI	Uncharacterized protein. (1894 aa)
	F9XQC5_ZYMTI	CSN2 COP9 signalosome complex. (493 aa)
	F9XQ76_ZYMTI	PCI domain-containing protein. (498 aa)
	F9XPE1_ZYMTI	Uncharacterized protein. (1485 aa)
	F9XNN3_ZYMTI	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (457 aa)
	MgSst2	Sst2-like protein. (508 aa)
	F9XN88_ZYMTI	H15 domain-containing protein. (154 aa)
	F9XMV5_ZYMTI	PCI domain-containing protein. (381 aa)
	INT6	Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (441 aa)
	F9XLT6_ZYMTI	CULLIN_2 domain-containing protein; Belongs to the cullin family. (775 aa)
	F9XLL7_ZYMTI	Uncharacterized protein. (233 aa)
	F9XLI8_ZYMTI	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (648 aa)
	F9XKA0_ZYMTI	Fork-head domain-containing protein. (90 aa)
	F9XK96_ZYMTI	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (460 aa)
	F9XK80_ZYMTI	RPA_C domain-containing protein. (280 aa)
	F9XK15_ZYMTI	Protein kinase domain-containing protein. (410 aa)
	F9XJF1_ZYMTI	HTH La-type RNA-binding domain-containing protein. (226 aa)
	F9XHQ4_ZYMTI	HSF_DOMAIN domain-containing protein. (119 aa)
	F9XHJ4_ZYMTI	Fork-head domain-containing protein. (813 aa)
	F9XGV8_ZYMTI	RFX-type winged-helix domain-containing protein. (878 aa)
	F9XGK7_ZYMTI	COP9 singlesome subunit 1. (448 aa)
	F9XGH2_ZYMTI	Uncharacterized protein. (791 aa)
	F9XEK6_ZYMTI	PCI domain-containing protein. (423 aa)
	F9XEH2_ZYMTI	CULLIN_2 domain-containing protein; Belongs to the cullin family. (827 aa)
	F9XEE4_ZYMTI	Uncharacterized protein. (254 aa)
	F9XED0_ZYMTI	Peptidase M24. (423 aa)
	MgSkn7	Response regulator receiver SKN7p. (653 aa)
	F9XDG8_ZYMTI	Uncharacterized protein. (615 aa)
	F9XDA1_ZYMTI	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (2074 aa)
	F9XD83_ZYMTI	PCI domain-containing protein. (502 aa)
	F9XBP7_ZYMTI	Fork-head domain-containing protein. (102 aa)
	F9XB39_ZYMTI	Uncharacterized protein. (1913 aa)
	F9XAA4_ZYMTI	GLUE N-terminal domain-containing protein. (611 aa)
	F9X8J5_ZYMTI	Uncharacterized protein. (2202 aa)
	F9X803_ZYMTI	Uncharacterized protein. (1932 aa)
	F9X7Y7_ZYMTI	Citron like protein. (1227 aa)
	F9X7C5_ZYMTI	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (260 aa)
	NIP1	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (870 aa)
	Sfl1	Transcription factor. (602 aa)
	F9X6C0_ZYMTI	HTH TFE/IIEalpha-type domain-containing protein. (404 aa)
	F9X4I6_ZYMTI	Uncharacterized protein. (1982 aa)
	F9X345_ZYMTI	CULLIN_2 domain-containing protein; Belongs to the cullin family. (762 aa)
	GliM	Putative O-methyltransferase. (421 aa)
	F9X1Y3_ZYMTI	Methyltransf_2 domain-containing protein. (352 aa)
	F9X0T9_ZYMTI	Uncharacterized protein. (194 aa)
	F9X0P7_ZYMTI	Uncharacterized protein. (367 aa)
	F9WZQ5_ZYMTI	Methyltransf_2 domain-containing protein. (432 aa)
	F9WZN7_ZYMTI	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (800 aa)
	F9WYS8_ZYMTI	Fork-head domain-containing protein. (68 aa)
	F9WYP0_ZYMTI	Uncharacterized protein. (150 aa)
	F9WXC2_ZYMTI	Uncharacterized protein. (178 aa)
	F9WXB6_ZYMTI	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (349 aa)
	F9WX45_ZYMTI	CSN4 COP9 signalosome complex subunit 4. (374 aa)
	F9WWN9_ZYMTI	PCI domain-containing protein. (509 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F9WWN9_ZYMTI	F9WX45_ZYMTI	F9WWN9	F9WX45	PCI domain-containing protein.	CSN4 COP9 signalosome complex subunit 4.	0.661
F9WWN9_ZYMTI	F9XD83_ZYMTI	F9WWN9	F9XD83	PCI domain-containing protein.	PCI domain-containing protein.	0.999
F9WWN9_ZYMTI	F9XEH2_ZYMTI	F9WWN9	F9XEH2	PCI domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.592
F9WWN9_ZYMTI	F9XEK6_ZYMTI	F9WWN9	F9XEK6	PCI domain-containing protein.	PCI domain-containing protein.	0.999
F9WWN9_ZYMTI	F9XLT6_ZYMTI	F9WWN9	F9XLT6	PCI domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.592
F9WWN9_ZYMTI	F9XMV5_ZYMTI	F9WWN9	F9XMV5	PCI domain-containing protein.	PCI domain-containing protein.	0.999
F9WWN9_ZYMTI	F9XQ76_ZYMTI	F9WWN9	F9XQ76	PCI domain-containing protein.	PCI domain-containing protein.	0.999
F9WWN9_ZYMTI	INT6	F9WWN9	F9XMB9	PCI domain-containing protein.	Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.464
F9WX45_ZYMTI	F9WWN9_ZYMTI	F9WX45	F9WWN9	CSN4 COP9 signalosome complex subunit 4.	PCI domain-containing protein.	0.661
F9WX45_ZYMTI	F9X345_ZYMTI	F9WX45	F9X345	CSN4 COP9 signalosome complex subunit 4.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.945
F9WX45_ZYMTI	F9XEH2_ZYMTI	F9WX45	F9XEH2	CSN4 COP9 signalosome complex subunit 4.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.862
F9WX45_ZYMTI	F9XGK7_ZYMTI	F9WX45	F9XGK7	CSN4 COP9 signalosome complex subunit 4.	COP9 singlesome subunit 1.	0.999
F9WX45_ZYMTI	F9XLT6_ZYMTI	F9WX45	F9XLT6	CSN4 COP9 signalosome complex subunit 4.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.856
F9WX45_ZYMTI	F9XQ76_ZYMTI	F9WX45	F9XQ76	CSN4 COP9 signalosome complex subunit 4.	PCI domain-containing protein.	0.724
F9WX45_ZYMTI	F9XQC5_ZYMTI	F9WX45	F9XQC5	CSN4 COP9 signalosome complex subunit 4.	CSN2 COP9 signalosome complex.	0.999
F9WX45_ZYMTI	INT6	F9WX45	F9XMB9	CSN4 COP9 signalosome complex subunit 4.	Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.495
F9WXB6_ZYMTI	F9X6C0_ZYMTI	F9WXB6	F9X6C0	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	HTH TFE/IIEalpha-type domain-containing protein.	0.602
F9WXB6_ZYMTI	F9XK15_ZYMTI	F9WXB6	F9XK15	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	Protein kinase domain-containing protein.	0.416
F9WXB6_ZYMTI	F9XLI8_ZYMTI	F9WXB6	F9XLI8	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
F9WYP0_ZYMTI	F9XED0_ZYMTI	F9WYP0	F9XED0	Uncharacterized protein.	Peptidase M24.	0.833