(8 nodes) Nucleotidyltransferase superfamily network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POLX2	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (670 aa)
	F9X6N8_ZYMTI	Topoisomerase-related protein. (565 aa)
	F9X7R6_ZYMTI	Uncharacterized protein. (486 aa)
	F9XJQ0_ZYMTI	Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (630 aa)
	F9XLA4_ZYMTI	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (559 aa)
	POLX1	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (590 aa)
	F9X3R2_ZYMTI	Uncharacterized protein. (486 aa)
	F9XJG9_ZYMTI	Uncharacterized protein. (924 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F9X3R2_ZYMTI	F9X6N8_ZYMTI	F9X3R2	F9X6N8	Uncharacterized protein.	Topoisomerase-related protein.	0.426
F9X3R2_ZYMTI	F9XLA4_ZYMTI	F9X3R2	F9XLA4	Uncharacterized protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.630
F9X6N8_ZYMTI	F9X3R2_ZYMTI	F9X6N8	F9X3R2	Topoisomerase-related protein.	Uncharacterized protein.	0.426
F9X6N8_ZYMTI	F9XLA4_ZYMTI	F9X6N8	F9XLA4	Topoisomerase-related protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.653
F9X7R6_ZYMTI	F9XLA4_ZYMTI	F9X7R6	F9XLA4	Uncharacterized protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.400
F9XLA4_ZYMTI	F9X3R2_ZYMTI	F9XLA4	F9X3R2	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Uncharacterized protein.	0.630
F9XLA4_ZYMTI	F9X6N8_ZYMTI	F9XLA4	F9X6N8	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Topoisomerase-related protein.	0.653
F9XLA4_ZYMTI	F9X7R6_ZYMTI	F9XLA4	F9X7R6	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Uncharacterized protein.	0.400
POLX1	POLX2	F9X0R1	F9X556	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.938
POLX2	POLX1	F9X556	F9X0R1	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.938