STRINGSTRING
F9X381_ZYMTI F9X381_ZYMTI LSM3 LSM3 F9X3X9_ZYMTI F9X3X9_ZYMTI F9X4G5_ZYMTI F9X4G5_ZYMTI F9X4R8_ZYMTI F9X4R8_ZYMTI LSM5 LSM5 F9XG58_ZYMTI F9XG58_ZYMTI F9XHM0_ZYMTI F9XHM0_ZYMTI F9XJ81_ZYMTI F9XJ81_ZYMTI LSM4 LSM4 F9XLF2_ZYMTI F9XLF2_ZYMTI F9XN89_ZYMTI F9XN89_ZYMTI LSM1 LSM1 F9X0F0_ZYMTI F9X0F0_ZYMTI F9X1C9_ZYMTI F9X1C9_ZYMTI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F9X381_ZYMTISm domain-containing protein. (83 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (94 aa)
F9X3X9_ZYMTIUncharacterized protein. (1130 aa)
F9X4G5_ZYMTINTP_transf_9 domain-containing protein. (150 aa)
F9X4R8_ZYMTIUncharacterized protein. (173 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (81 aa)
F9XG58_ZYMTISm domain-containing protein. (98 aa)
F9XHM0_ZYMTIUncharacterized protein. (300 aa)
F9XJ81_ZYMTIPAT1 domain-containing protein. (784 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (129 aa)
F9XLF2_ZYMTINudix hydrolase domain-containing protein. (256 aa)
F9XN89_ZYMTIUncharacterized protein; Belongs to the DEAD box helicase family. (504 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (132 aa)
F9X0F0_ZYMTIUncharacterized protein. (204 aa)
F9X1C9_ZYMTIU6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (100 aa)
Your Current Organism:
Zymoseptoria tritici IPO323
NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323
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