(149 nodes) rRNA processing network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9XAF5_ZYMTI	Methyltransf_25 domain-containing protein. (154 aa)
	F9WYP0_ZYMTI	Uncharacterized protein. (150 aa)
	cnxG	Molybdopterin synthase sulfur carrier subunit; Acts as a sulfur carrier required for molybdopterin biosynthesis. Component of the molybdopterin synthase complex that catalyzes the conversion of precursor Z into molybdopterin by mediating the incorporation of 2 sulfur atoms into precursor Z to generate a dithiolene group. In the complex, serves as sulfur donor by being thiocarboxylated (-COSH) at its C-terminus by UBA4. After interaction with MOCS2B, the sulfur is then transferred to precursor Z to form molybdopterin. (97 aa)
	F9WYX8_ZYMTI	SpoU_methylase domain-containing protein. (253 aa)
	F9WYX9_ZYMTI	Uncharacterized protein. (140 aa)
	F9WZ73_ZYMTI	Uncharacterized protein. (899 aa)
	F9WZA4_ZYMTI	Uncharacterized protein. (1203 aa)
	F9WZL9_ZYMTI	ECR1_N domain-containing protein. (311 aa)
	F9WZX8_ZYMTI	Bms1-type G domain-containing protein. (823 aa)
	F9WZZ4_ZYMTI	Uncharacterized protein. (375 aa)
	F9X035_ZYMTI	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (121 aa)
	F9X046_ZYMTI	Uncharacterized protein. (347 aa)
	F9X0A2_ZYMTI	WD_REPEATS_REGION domain-containing protein. (557 aa)
	F9X0Q6_ZYMTI	Uncharacterized protein. (260 aa)
	F9X0Z7_ZYMTI	CBF domain-containing protein. (552 aa)
	F9X182_ZYMTI	Brix domain-containing protein. (295 aa)
	F9X190_ZYMTI	Sas10 domain-containing protein. (625 aa)
	F9X198_ZYMTI	Uncharacterized protein. (740 aa)
	F9X1B2_ZYMTI	RNase_PH domain-containing protein. (354 aa)
	F9X1N0_ZYMTI	GN3L_Grn1 domain-containing protein. (341 aa)
	F9X1T1_ZYMTI	Uncharacterized protein. (56 aa)
	F9X1V3_ZYMTI	Uncharacterized protein. (445 aa)
	F9X2B4_ZYMTI	BP28CT domain-containing protein. (1780 aa)
	F9X2M1_ZYMTI	Uncharacterized protein; Belongs to the DEAD box helicase family. (446 aa)
	F9X2Z8_ZYMTI	Uncharacterized protein. (328 aa)
	F9X316_ZYMTI	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (213 aa)
	F9X317_ZYMTI	Uncharacterized protein. (930 aa)
	F9X322_ZYMTI	Uncharacterized protein. (547 aa)
	F9X336_ZYMTI	Uncharacterized protein. (501 aa)
	F9X340_ZYMTI	Uncharacterized protein. (1790 aa)
	F9X3K9_ZYMTI	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (97 aa)
	F9X3Z2_ZYMTI	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	F9X3Z5_ZYMTI	Uncharacterized protein. (1205 aa)
	F9X441_ZYMTI	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	F9X450_ZYMTI	WD_REPEATS_REGION domain-containing protein. (1179 aa)
	F9X4F7_ZYMTI	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	F9X4L1_ZYMTI	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (155 aa)
	F9X4Z8_ZYMTI	Uncharacterized protein. (277 aa)
	F9X5H7_ZYMTI	Uncharacterized protein. (292 aa)
	F9X5H9_ZYMTI	Uncharacterized protein. (392 aa)
	F9X5M5_ZYMTI	Uncharacterized protein. (92 aa)
	F9X5S0_ZYMTI	RTC domain-containing protein. (420 aa)
	F9X5S7_ZYMTI	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (190 aa)
	F9X5T3_ZYMTI	Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (557 aa)
	F9X6J9_ZYMTI	Uncharacterized protein. (1050 aa)
	F9X6R0_ZYMTI	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (265 aa)
	F9X6R1_ZYMTI	S1 motif domain-containing protein. (187 aa)
	F9X745_ZYMTI	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (134 aa)
	F9X7K7_ZYMTI	Uncharacterized protein. (961 aa)
	F9X852_ZYMTI	RNase_PH domain-containing protein. (331 aa)
	F9X8N1_ZYMTI	Uncharacterized protein. (453 aa)
	F9X8Q4_ZYMTI	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (201 aa)
	F9X922_ZYMTI	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (156 aa)
	F9X971_ZYMTI	Uncharacterized protein. (883 aa)
	F9X9E4_ZYMTI	S10_plectin domain-containing protein. (171 aa)
	F9XA69_ZYMTI	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (241 aa)
	F9XRI7_ZYMTI	Helicase C-terminal domain-containing protein. (64 aa)
	F9XQP1_ZYMTI	Uncharacterized protein. (82 aa)
	F9XQG9_ZYMTI	Uncharacterized protein. (575 aa)
	F9XQB5_ZYMTI	40S ribosomal protein S27. (82 aa)
	F9XQA7_ZYMTI	Uncharacterized protein. (598 aa)
	F9XQA6_ZYMTI	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	F9XPY3_ZYMTI	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (262 aa)
	F9XPW9_ZYMTI	WD_REPEATS_REGION domain-containing protein. (489 aa)
	F9XPV2_ZYMTI	Ribosomal small subunit Rsm22, mitochondria. (828 aa)
	F9XPV1_ZYMTI	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (354 aa)
	F9XPS8_ZYMTI	Uncharacterized protein. (129 aa)
	F9XPM6_ZYMTI	Uncharacterized protein. (249 aa)
	F9XP84_ZYMTI	Uncharacterized protein. (1083 aa)
	F9XNY0_ZYMTI	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	F9XNX7_ZYMTI	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (711 aa)
	F9XNR7_ZYMTI	Uncharacterized protein; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (311 aa)
	F9XNQ9_ZYMTI	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (580 aa)
	F9XN32_ZYMTI	THUMP domain-containing protein. (289 aa)
	F9XN15_ZYMTI	Uncharacterized protein. (257 aa)
	F9XN11_ZYMTI	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (125 aa)
	F9XML9_ZYMTI	HRDC domain-containing protein. (796 aa)
	F9XME7_ZYMTI	U3 small nucleolar RNA-associated protein 22. (1071 aa)
	F9XMA5_ZYMTI	Uncharacterized protein. (345 aa)
	TSR3	Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (391 aa)
	F9XM11_ZYMTI	Ribosomal_S10 domain-containing protein. (117 aa)
	F9XM07_ZYMTI	Nop domain-containing protein. (545 aa)
	F9XLL6_ZYMTI	S4 RNA-binding domain-containing protein. (462 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (805 aa)
	F9XL36_ZYMTI	Bms1-type G domain-containing protein. (1159 aa)
	F9XK66_ZYMTI	ULP_PROTEASE domain-containing protein. (221 aa)
	F9XK15_ZYMTI	Protein kinase domain-containing protein. (410 aa)
	F9XJX9_ZYMTI	RNase_PH domain-containing protein. (285 aa)
	F9XJA3_ZYMTI	Methyltransf_25 domain-containing protein. (214 aa)
	F9XJA0_ZYMTI	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	F9XIV6_ZYMTI	Exonuclease domain-containing protein. (394 aa)
	F9XIQ1_ZYMTI	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (430 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (257 aa)
	F9XIG3_ZYMTI	WD_REPEATS_REGION domain-containing protein. (895 aa)
	F9XI54_ZYMTI	Ribosomal_L28e domain-containing protein. (157 aa)
	F9XHN2_ZYMTI	Ribosomal_L2_C domain-containing protein. (254 aa)
	F9XHJ6_ZYMTI	Uncharacterized protein. (472 aa)
	F9XHB3_ZYMTI	Exonuclease domain-containing protein. (304 aa)
	F9XHA8_ZYMTI	Exonuclease domain-containing protein. (394 aa)
	F9XHA7_ZYMTI	Uncharacterized protein. (461 aa)
	F9XH37_ZYMTI	RIX1 domain-containing protein. (748 aa)
	F9XGG4_ZYMTI	WD_REPEATS_REGION domain-containing protein. (583 aa)
	F9XGD9_ZYMTI	PINc domain-containing protein. (196 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (462 aa)
	F9XFM1_ZYMTI	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (119 aa)
	F9XFC1_ZYMTI	Uncharacterized protein. (68 aa)
	F9XFB2_ZYMTI	KH domain-containing protein. (255 aa)
	F9XFA0_ZYMTI	Uncharacterized protein. (180 aa)
	F9XEQ9_ZYMTI	WD_REPEATS_REGION domain-containing protein. (943 aa)
	F9XEN0_ZYMTI	Uncharacterized protein. (275 aa)
	F9XEK5_ZYMTI	WD_REPEATS_REGION domain-containing protein. (448 aa)
	F9XE95_ZYMTI	Uncharacterized protein. (683 aa)
	F9XE87_ZYMTI	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (329 aa)
	F9XE85_ZYMTI	S4 RNA-binding domain-containing protein. (187 aa)
	F9XDU9_ZYMTI	DRIM domain-containing protein. (2527 aa)
	F9XDN9_ZYMTI	Ribosomal_L18e/L15P domain-containing protein. (189 aa)
	F9XDE9_ZYMTI	FtsJ domain-containing protein. (330 aa)
	F9XCX2_ZYMTI	Uncharacterized protein. (616 aa)
	F9XCL5_ZYMTI	DhaL domain-containing protein. (887 aa)
	F9XC17_ZYMTI	Uncharacterized protein. (146 aa)
	F9XC07_ZYMTI	Uncharacterized protein. (402 aa)
	F9XC05_ZYMTI	Uncharacterized protein. (331 aa)
	F9XBT0_ZYMTI	WD_REPEATS_REGION domain-containing protein. (961 aa)
	NAT10	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1091 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (691 aa)
	F9XB66_ZYMTI	Methyltransf_25 domain-containing protein. (215 aa)
	F9XB53_ZYMTI	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	F9XAR4_ZYMTI	Uncharacterized protein. (204 aa)
	F9XAQ8_ZYMTI	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family. (265 aa)
	F9XAQ5_ZYMTI	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (269 aa)
	F9XAN4_ZYMTI	Uncharacterized protein. (130 aa)
	F9XAI1_ZYMTI	Uncharacterized protein. (432 aa)
	F9XAH6_ZYMTI	Uncharacterized protein; Belongs to the DEAD box helicase family. (503 aa)
	F9WW66_ZYMTI	Uncharacterized protein. (311 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (307 aa)
	F9WWC2_ZYMTI	Uncharacterized protein. (701 aa)
	F9WWG9_ZYMTI	Uncharacterized protein. (288 aa)
	F9WWI2_ZYMTI	Uncharacterized protein. (483 aa)
	F9WWI3_ZYMTI	RNase_PH domain-containing protein. (202 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (695 aa)
	F9WX88_ZYMTI	Uncharacterized protein. (319 aa)
	F9WXK8_ZYMTI	Uncharacterized protein. (116 aa)
	F9WXN0_ZYMTI	Uncharacterized protein. (357 aa)
	F9WXN2_ZYMTI	Nop domain-containing protein. (572 aa)
	F9WXS2_ZYMTI	WD_REPEATS_REGION domain-containing protein. (551 aa)
	F9WXU1_ZYMTI	RNase_PH domain-containing protein. (250 aa)
	F9WYC1_ZYMTI	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (143 aa)
	F9WYD5_ZYMTI	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (199 aa)
	F9WYM0_ZYMTI	Uncharacterized protein. (73 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	F9WW66_ZYMTI	F9WX86	F9WW66	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.447
ERB1	F9WWC2_ZYMTI	F9WX86	F9WWC2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.830
ERB1	F9WXK8_ZYMTI	F9WX86	F9WXK8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.841
ERB1	F9WXN0_ZYMTI	F9WX86	F9WXN0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.525
ERB1	F9WXN2_ZYMTI	F9WX86	F9WXN2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nop domain-containing protein.	0.965
ERB1	F9WXS2_ZYMTI	F9WX86	F9WXS2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.499
ERB1	F9WZ73_ZYMTI	F9WX86	F9WZ73	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.779
ERB1	F9WZA4_ZYMTI	F9WX86	F9WZA4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.668
ERB1	F9WZX8_ZYMTI	F9WX86	F9WZX8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Bms1-type G domain-containing protein.	0.925
ERB1	F9X035_ZYMTI	F9WX86	F9X035	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.667
ERB1	F9X0A2_ZYMTI	F9WX86	F9X0A2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.938
ERB1	F9X0Q6_ZYMTI	F9WX86	F9X0Q6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.992
ERB1	F9X0Z7_ZYMTI	F9WX86	F9X0Z7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	CBF domain-containing protein.	0.754
ERB1	F9X182_ZYMTI	F9WX86	F9X182	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Brix domain-containing protein.	0.822
ERB1	F9X190_ZYMTI	F9WX86	F9X190	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Sas10 domain-containing protein.	0.712
ERB1	F9X198_ZYMTI	F9WX86	F9X198	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.897
ERB1	F9X1N0_ZYMTI	F9WX86	F9X1N0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	GN3L_Grn1 domain-containing protein.	0.999
ERB1	F9X1V3_ZYMTI	F9WX86	F9X1V3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.747
ERB1	F9X2B4_ZYMTI	F9WX86	F9X2B4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	BP28CT domain-containing protein.	0.867
ERB1	F9X2M1_ZYMTI	F9WX86	F9X2M1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.859