(48 nodes) DNA Damage Bypass network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9X345_ZYMTI	CULLIN_2 domain-containing protein; Belongs to the cullin family. (762 aa)
	F9X339_ZYMTI	WD_REPEATS_REGION domain-containing protein. (454 aa)
	F9X281_ZYMTI	Integrase_H2C2 domain-containing protein. (289 aa)
	F9X254_ZYMTI	AAA domain-containing protein. (758 aa)
	F9X1X2_ZYMTI	AZUL domain-containing protein. (801 aa)
	F9X0U5_ZYMTI	Uncharacterized protein. (147 aa)
	F9X0E3_ZYMTI	CIA30 domain-containing protein. (274 aa)
	F9X0E2_ZYMTI	BZIP domain-containing protein. (278 aa)
	F9X084_ZYMTI	UmuC domain-containing protein. (596 aa)
	F9WYP8_ZYMTI	Uncharacterized protein. (354 aa)
	F9WZ69_ZYMTI	UmuC domain-containing protein. (653 aa)
	F9WZI0_ZYMTI	AAA domain-containing protein. (682 aa)
	F9X013_ZYMTI	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
	F9XS86_ZYMTI	Uncharacterized protein. (155 aa)
	F9XRM8_ZYMTI	Uncharacterized protein. (985 aa)
	F9XR08_ZYMTI	Uncharacterized protein. (545 aa)
	F9XR06_ZYMTI	Uncharacterized protein. (226 aa)
	F9XQB1_ZYMTI	DNA polymerase. (1595 aa)
	F9XQ94_ZYMTI	Ubiquitin carboxyl-terminal hydrolase. (498 aa)
	F9XP68_ZYMTI	AAA domain-containing protein. (677 aa)
	F9XP05_ZYMTI	Uncharacterized protein. (297 aa)
	F9XNC3_ZYMTI	Uncharacterized protein. (857 aa)
	F9XLU4_ZYMTI	AAA domain-containing protein. (912 aa)
	F9XL41_ZYMTI	AAA domain-containing protein. (198 aa)
	F9XK06_ZYMTI	WD_REPEATS_REGION domain-containing protein. (1008 aa)
	F9XJR4_ZYMTI	CBFD_NFYB_HMF domain-containing protein. (113 aa)
	F9XJM5_ZYMTI	Uncharacterized protein. (198 aa)
	F9XJH4_ZYMTI	HORMA domain-containing protein. (230 aa)
	F9XJ93_ZYMTI	Uncharacterized protein. (426 aa)
	F9XJ33_ZYMTI	CPSF_A domain-containing protein. (1143 aa)
	F9XIX8_ZYMTI	Uncharacterized protein. (411 aa)
	F9XIA1_ZYMTI	USP domain-containing protein. (529 aa)
	F9XHY3_ZYMTI	RING-type domain-containing protein. (118 aa)
	F9XHW6_ZYMTI	CHY-type domain-containing protein. (122 aa)
	F9XDN2_ZYMTI	Ubiquitin-like domain-containing protein. (155 aa)
	F9XDM2_ZYMTI	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (646 aa)
	F9XDF0_ZYMTI	BRCT domain-containing protein. (265 aa)
	F9XD09_ZYMTI	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1164 aa)
	F9XCR1_ZYMTI	Uncharacterized protein. (531 aa)
	F9XC75_ZYMTI	Ubiquitin carboxyl-terminal hydrolase. (761 aa)
	F9X9I9_ZYMTI	USP domain-containing protein; Belongs to the peptidase C19 family. (820 aa)
	F9X7T7_ZYMTI	UmuC domain-containing protein. (479 aa)
	F9X6B8_ZYMTI	Uncharacterized protein; Belongs to the peptidase C19 family. (1442 aa)
	F9X642_ZYMTI	UmuC domain-containing protein. (678 aa)
	F9X3W2_ZYMTI	Uncharacterized protein. (106 aa)
	F9X3S8_ZYMTI	AAA domain-containing protein. (1055 aa)
	F9X3N0_ZYMTI	Uncharacterized protein; Belongs to the AAA ATPase family. (676 aa)
	F9X352_ZYMTI	SprT-like domain-containing protein. (715 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F9WYP8_ZYMTI	F9XDM2_ZYMTI	F9WYP8	F9XDM2	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.522
F9WZ69_ZYMTI	F9X084_ZYMTI	F9WZ69	F9X084	UmuC domain-containing protein.	UmuC domain-containing protein.	0.688
F9WZ69_ZYMTI	F9X0E2_ZYMTI	F9WZ69	F9X0E2	UmuC domain-containing protein.	BZIP domain-containing protein.	0.461
F9WZ69_ZYMTI	F9X0E3_ZYMTI	F9WZ69	F9X0E3	UmuC domain-containing protein.	CIA30 domain-containing protein.	0.461
F9WZ69_ZYMTI	F9X352_ZYMTI	F9WZ69	F9X352	UmuC domain-containing protein.	SprT-like domain-containing protein.	0.425
F9WZ69_ZYMTI	F9X3S8_ZYMTI	F9WZ69	F9X3S8	UmuC domain-containing protein.	AAA domain-containing protein.	0.562
F9WZ69_ZYMTI	F9X642_ZYMTI	F9WZ69	F9X642	UmuC domain-containing protein.	UmuC domain-containing protein.	0.797
F9WZ69_ZYMTI	F9X6B8_ZYMTI	F9WZ69	F9X6B8	UmuC domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.424
F9WZ69_ZYMTI	F9X7T7_ZYMTI	F9WZ69	F9X7T7	UmuC domain-containing protein.	UmuC domain-containing protein.	0.797
F9WZ69_ZYMTI	F9XD09_ZYMTI	F9WZ69	F9XD09	UmuC domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.914
F9WZ69_ZYMTI	F9XDF0_ZYMTI	F9WZ69	F9XDF0	UmuC domain-containing protein.	BRCT domain-containing protein.	0.902
F9WZ69_ZYMTI	F9XDM2_ZYMTI	F9WZ69	F9XDM2	UmuC domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.608
F9WZ69_ZYMTI	F9XDN2_ZYMTI	F9WZ69	F9XDN2	UmuC domain-containing protein.	Ubiquitin-like domain-containing protein.	0.461
F9WZ69_ZYMTI	F9XJH4_ZYMTI	F9WZ69	F9XJH4	UmuC domain-containing protein.	HORMA domain-containing protein.	0.861
F9WZ69_ZYMTI	F9XQB1_ZYMTI	F9WZ69	F9XQB1	UmuC domain-containing protein.	DNA polymerase.	0.890
F9WZI0_ZYMTI	F9X1X2_ZYMTI	F9WZI0	F9X1X2	AAA domain-containing protein.	AZUL domain-containing protein.	0.576
F9WZI0_ZYMTI	F9X352_ZYMTI	F9WZI0	F9X352	AAA domain-containing protein.	SprT-like domain-containing protein.	0.468
F9X013_ZYMTI	F9X0E2_ZYMTI	F9X013	F9X0E2	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	BZIP domain-containing protein.	0.769
F9X013_ZYMTI	F9X0E3_ZYMTI	F9X013	F9X0E3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	CIA30 domain-containing protein.	0.769
F9X013_ZYMTI	F9X339_ZYMTI	F9X013	F9X339	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	WD_REPEATS_REGION domain-containing protein.	0.608