(35 nodes) Mixed, incl. Retromer complex, and WASH complex network (Colobus angolensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HSBP1	Heat shock factor binding protein 1. (76 aa)
	SNX31	Sorting nexin 31. (440 aa)
	LOC105517729	CAP-ZIP_m domain-containing protein. (1141 aa)
	SNX30	Sorting nexin family member 30. (400 aa)
	CYTIP	Cytohesin 1 interacting protein. (359 aa)
	TRAFD1	TRAF-type zinc finger domain containing 1. (594 aa)
	SNX12	Sorting nexin 12. (174 aa)
	VPS35	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (796 aa)
	SNX5	Sorting nexin; Involved in several stages of intracellular trafficking. (404 aa)
	VPS29	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (214 aa)
	ENSCANP00000016756	Uncharacterized protein. (107 aa)
	SNX4	Sorting nexin 4. (431 aa)
	VPS26B	VPS26, retromer complex component B. (336 aa)
	TBC1D5	TBC1 domain family member 5. (821 aa)
	SNX13	Sorting nexin 13. (957 aa)
	WASHC1	WASH complex subunit 1. (469 aa)
	ENSCANP00000025282	Uncharacterized protein. (145 aa)
	SNX3	Sorting nexin 3. (162 aa)
	SNX1	Sorting nexin 1. (557 aa)
	SNX6	Sorting nexin 6. (375 aa)
	WASHC5	WASH complex subunit 5. (1159 aa)
	SNX10	Sorting nexin 10. (201 aa)
	SNX27	Sorting nexin 27. (435 aa)
	ENSCANP00000030632	Uncharacterized protein. (87 aa)
	SNX7	Sorting nexin 7. (451 aa)
	SNX32	Sorting nexin; Involved in several stages of intracellular trafficking. (403 aa)
	WASHC3	WASH complex subunit 3. (194 aa)
	SNX17	Sorting nexin 17. (470 aa)
	ENSCANP00000034849	Uncharacterized protein. (185 aa)
	SNX8	Sorting nexin 8. (388 aa)
	SNX14	Sorting nexin 14. (937 aa)
	VPS26A	Uncharacterized protein. (324 aa)
	SNX2	Sorting nexin 2. (402 aa)
	WASHC4	WASH complex subunit 4. (1174 aa)
	ENSCANP00000039642	Uncharacterized protein. (176 aa)

Your Current Organism:

Colobus angolensis

NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYTIP	ENSCANP00000030632	ENSCANP00000007759	ENSCANP00000030632	Cytohesin 1 interacting protein.	Uncharacterized protein.	0.457
CYTIP	SNX27	ENSCANP00000007759	ENSCANP00000029193	Cytohesin 1 interacting protein.	Sorting nexin 27.	0.457
ENSCANP00000016756	ENSCANP00000039642	ENSCANP00000016756	ENSCANP00000039642	Uncharacterized protein.	Uncharacterized protein.	0.654
ENSCANP00000016756	LOC105517729	ENSCANP00000016756	ENSCANP00000005684	Uncharacterized protein.	CAP-ZIP_m domain-containing protein.	0.899
ENSCANP00000016756	TBC1D5	ENSCANP00000016756	ENSCANP00000021684	Uncharacterized protein.	TBC1 domain family member 5.	0.400
ENSCANP00000016756	VPS29	ENSCANP00000016756	ENSCANP00000014448	Uncharacterized protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.637
ENSCANP00000016756	VPS35	ENSCANP00000016756	ENSCANP00000011633	Uncharacterized protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.644
ENSCANP00000016756	WASHC1	ENSCANP00000016756	ENSCANP00000025195	Uncharacterized protein.	WASH complex subunit 1.	0.838
ENSCANP00000016756	WASHC3	ENSCANP00000016756	ENSCANP00000033785	Uncharacterized protein.	WASH complex subunit 3.	0.654
ENSCANP00000016756	WASHC4	ENSCANP00000016756	ENSCANP00000039616	Uncharacterized protein.	WASH complex subunit 4.	0.732
ENSCANP00000016756	WASHC5	ENSCANP00000016756	ENSCANP00000028468	Uncharacterized protein.	WASH complex subunit 5.	0.792
ENSCANP00000025282	ENSCANP00000034849	ENSCANP00000025282	ENSCANP00000034849	Uncharacterized protein.	Uncharacterized protein.	0.402
ENSCANP00000025282	SNX1	ENSCANP00000025282	ENSCANP00000027109	Uncharacterized protein.	Sorting nexin 1.	0.899
ENSCANP00000025282	SNX12	ENSCANP00000025282	ENSCANP00000011284	Uncharacterized protein.	Sorting nexin 12.	0.401
ENSCANP00000025282	SNX2	ENSCANP00000025282	ENSCANP00000037943	Uncharacterized protein.	Sorting nexin 2.	0.900
ENSCANP00000025282	SNX3	ENSCANP00000025282	ENSCANP00000025503	Uncharacterized protein.	Sorting nexin 3.	0.407
ENSCANP00000025282	SNX30	ENSCANP00000025282	ENSCANP00000006264	Uncharacterized protein.	Sorting nexin family member 30.	0.653
ENSCANP00000025282	SNX32	ENSCANP00000025282	ENSCANP00000033144	Uncharacterized protein.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.717
ENSCANP00000025282	SNX4	ENSCANP00000025282	ENSCANP00000019969	Uncharacterized protein.	Sorting nexin 4.	0.737
ENSCANP00000025282	SNX6	ENSCANP00000025282	ENSCANP00000028045	Uncharacterized protein.	Sorting nexin 6.	0.822