13 items (Colobus angolensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSCANP00000004735	Uncharacterized protein. (155 aa)
	ANKRD45	ANK_REP_REGION domain-containing protein. (264 aa)
	DNAJC3	DnaJ heat shock protein family (Hsp40) member C3. (504 aa)
	SECISBP2L	SECIS binding protein 2 like. (1101 aa)
	CRELD2	Cysteine rich with EGF like domains 2. (402 aa)
	LOC105521187	Uncharacterized protein; Belongs to the heat shock protein 70 family. (546 aa)
	DNAJB11	J domain-containing protein. (358 aa)
	DNAJC10	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins. (793 aa)
	SDF2L1	Stromal cell derived factor 2 like 1. (210 aa)
	HSP90B1	Heat shock protein 90 beta family member 1. (804 aa)
	MANF	Mesencephalic astrocyte derived neurotrophic factor. (150 aa)
	CANX	Calnexin. (592 aa)
	DNAJC1	DnaJ heat shock protein family (Hsp40) member C1. (556 aa)

Your Current Organism:

Colobus angolensis

NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKRD45	CANX	ENSCANP00000006339	ENSCANP00000035979	ANK_REP_REGION domain-containing protein.	Calnexin.	0.872
ANKRD45	DNAJB11	ENSCANP00000006339	ENSCANP00000016477	ANK_REP_REGION domain-containing protein.	J domain-containing protein.	0.654
ANKRD45	DNAJC1	ENSCANP00000006339	ENSCANP00000037622	ANK_REP_REGION domain-containing protein.	DnaJ heat shock protein family (Hsp40) member C1.	0.546
ANKRD45	DNAJC10	ENSCANP00000006339	ENSCANP00000023317	ANK_REP_REGION domain-containing protein.	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	0.980
ANKRD45	DNAJC3	ENSCANP00000006339	ENSCANP00000011142	ANK_REP_REGION domain-containing protein.	DnaJ heat shock protein family (Hsp40) member C3.	0.714
ANKRD45	ENSCANP00000004735	ENSCANP00000006339	ENSCANP00000004735	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.863
ANKRD45	HSP90B1	ENSCANP00000006339	ENSCANP00000034613	ANK_REP_REGION domain-containing protein.	Heat shock protein 90 beta family member 1.	0.899
ANKRD45	MANF	ENSCANP00000006339	ENSCANP00000035687	ANK_REP_REGION domain-containing protein.	Mesencephalic astrocyte derived neurotrophic factor.	0.754
ANKRD45	SECISBP2L	ENSCANP00000006339	ENSCANP00000011965	ANK_REP_REGION domain-containing protein.	SECIS binding protein 2 like.	0.830
CANX	ANKRD45	ENSCANP00000035979	ENSCANP00000006339	Calnexin.	ANK_REP_REGION domain-containing protein.	0.872
CANX	DNAJC10	ENSCANP00000035979	ENSCANP00000023317	Calnexin.	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	0.751
CANX	ENSCANP00000004735	ENSCANP00000035979	ENSCANP00000004735	Calnexin.	Uncharacterized protein.	0.948
CANX	HSP90B1	ENSCANP00000035979	ENSCANP00000034613	Calnexin.	Heat shock protein 90 beta family member 1.	0.859
CANX	LOC105521187	ENSCANP00000035979	ENSCANP00000014811	Calnexin.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.933
CANX	SECISBP2L	ENSCANP00000035979	ENSCANP00000011965	Calnexin.	SECIS binding protein 2 like.	0.621
CRELD2	DNAJB11	ENSCANP00000014347	ENSCANP00000016477	Cysteine rich with EGF like domains 2.	J domain-containing protein.	0.854
CRELD2	ENSCANP00000004735	ENSCANP00000014347	ENSCANP00000004735	Cysteine rich with EGF like domains 2.	Uncharacterized protein.	0.436
CRELD2	HSP90B1	ENSCANP00000014347	ENSCANP00000034613	Cysteine rich with EGF like domains 2.	Heat shock protein 90 beta family member 1.	0.503
CRELD2	LOC105521187	ENSCANP00000014347	ENSCANP00000014811	Cysteine rich with EGF like domains 2.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.689
CRELD2	MANF	ENSCANP00000014347	ENSCANP00000035687	Cysteine rich with EGF like domains 2.	Mesencephalic astrocyte derived neurotrophic factor.	0.902