Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGO1 | DCP1A | ENSCANP00000032455 | ENSCANP00000000541 | Argonaute RISC component 1; Belongs to the argonaute family. | Decapping mRNA 1A. | 0.471 |
| AGO1 | DCP2 | ENSCANP00000032455 | ENSCANP00000013677 | Argonaute RISC component 1; Belongs to the argonaute family. | Decapping mRNA 2. | 0.622 |
| AGO1 | EDC3 | ENSCANP00000032455 | ENSCANP00000010597 | Argonaute RISC component 1; Belongs to the argonaute family. | Enhancer of mRNA decapping 3. | 0.401 |
| AGO1 | HELZ2 | ENSCANP00000032455 | ENSCANP00000019613 | Argonaute RISC component 1; Belongs to the argonaute family. | Helicase with zinc finger 2. | 0.414 |
| AGO1 | POLR2D | ENSCANP00000032455 | ENSCANP00000039979 | Argonaute RISC component 1; Belongs to the argonaute family. | RNA polymerase II subunit D. | 0.405 |
| AGO1 | SKIV2L | ENSCANP00000032455 | ENSCANP00000032207 | Argonaute RISC component 1; Belongs to the argonaute family. | Ski2 like RNA helicase. | 0.408 |
| AGO1 | UPF1 | ENSCANP00000032455 | ENSCANP00000013001 | Argonaute RISC component 1; Belongs to the argonaute family. | UPF1 RNA helicase and ATPase. | 0.424 |
| AGO1 | XRN1 | ENSCANP00000032455 | ENSCANP00000028346 | Argonaute RISC component 1; Belongs to the argonaute family. | 5'-3' exoribonuclease 1. | 0.446 |
| ATM | EIF3E | ENSCANP00000015871 | ENSCANP00000004038 | Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] | Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] | 0.415 |
| ATM | MLH1 | ENSCANP00000015871 | ENSCANP00000002811 | Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] | MutL homolog 1. | 0.889 |
| ATM | SMG1 | ENSCANP00000015871 | ENSCANP00000021914 | Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] | SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. | 0.688 |
| BCLAF1 | THRAP3 | ENSCANP00000038880 | ENSCANP00000038717 | BCL2 associated transcription factor 1. | Thyroid hormone receptor associated protein 3. | 0.833 |
| CASC3 | DCP1A | ENSCANP00000002447 | ENSCANP00000000541 | CASC3 exon junction complex subunit. | Decapping mRNA 1A. | 0.635 |
| CASC3 | DCP1B | ENSCANP00000002447 | ENSCANP00000025190 | CASC3 exon junction complex subunit. | Decapping mRNA 1B. | 0.545 |
| CASC3 | DDX5 | ENSCANP00000002447 | ENSCANP00000029768 | CASC3 exon junction complex subunit. | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | 0.400 |
| CASC3 | DHX34 | ENSCANP00000002447 | ENSCANP00000027614 | CASC3 exon junction complex subunit. | DExH-box helicase 34. | 0.664 |
| CASC3 | EIF4A3 | ENSCANP00000002447 | ENSCANP00000039676 | CASC3 exon junction complex subunit. | Eukaryotic translation initiation factor 4A3. | 0.998 |
| CASC3 | ENSCANP00000013556 | ENSCANP00000002447 | ENSCANP00000013556 | CASC3 exon junction complex subunit. | RRM domain-containing protein. | 0.736 |
| CASC3 | ENSCANP00000026116 | ENSCANP00000002447 | ENSCANP00000026116 | CASC3 exon junction complex subunit. | Uncharacterized protein. | 0.554 |
| CASC3 | LOC105517234 | ENSCANP00000002447 | ENSCANP00000025752 | CASC3 exon junction complex subunit. | Uncharacterized protein. | 0.959 |
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