STRINGSTRING
CAVIN1 CAVIN1 BAZ2A BAZ2A SMARCB1 SMARCB1 TCOF1 TCOF1 RRN3 RRN3 ZNRD1 ZNRD1 CD3EAP CD3EAP POLR1A POLR1A TAF1 TAF1 TAF1B TAF1B PIH1D1 PIH1D1 POLR1E POLR1E GTF2H5 GTF2H5 TAF1C TAF1C TTF1 TTF1 GTF2H1 GTF2H1 ERCC6 ERCC6 TAF1A TAF1A SMARCA4 SMARCA4 LOC105517070 LOC105517070 ERCC2 ERCC2 UBTF UBTF POLR2L POLR2L POLR1C POLR1C
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAVIN1Caveolae associated protein 1. (390 aa)
BAZ2ABromodomain adjacent to zinc finger domain 2A. (1909 aa)
SMARCB1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (394 aa)
TCOF1Treacle ribosome biogenesis factor 1. (1482 aa)
RRN3RRN3 homolog, RNA polymerase I transcription factor. (512 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
CD3EAPCD3e molecule associated protein. (513 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1699 aa)
TAF1Transcription initiation factor TFIID subunit. (1926 aa)
TAF1BTATA-box binding protein associated factor, RNA polymerase I subunit B. (588 aa)
PIH1D1PIH1 domain containing 1. (290 aa)
POLR1ERNA polymerase I subunit E. (477 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
TAF1CTATA-box binding protein associated factor, RNA polymerase I subunit C. (843 aa)
TTF1Transcription termination factor 1. (775 aa)
GTF2H1General transcription factor IIH subunit 1. (557 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1494 aa)
TAF1ATATA-box binding protein associated factor, RNA polymerase I subunit A. (451 aa)
SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4. (1686 aa)
LOC105517070Uncharacterized protein. (488 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (760 aa)
UBTFUpstream binding transcription factor. (764 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
POLR1CRNA polymerase I and III subunit C. (350 aa)
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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