41 items (Colobus angolensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC105518137	Uncharacterized protein. (722 aa)
	GNAT1	G protein subunit alpha transducin 1. (350 aa)
	PCDHB13	Protocadherin beta 13. (685 aa)
	LOC105515694	Uncharacterized protein. (591 aa)
	RP1L1	RP1 like 1. (2324 aa)
	KIF17	Kinesin family member 17; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1029 aa)
	MYO7A	Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2215 aa)
	CETN2	Centrin 2. (172 aa)
	WDR19	WD repeat domain 19. (1342 aa)
	USH1G	USH1 protein network component sans. (461 aa)
	CETN3	Centrin 3. (191 aa)
	LCA5	Lebercilin LCA5. (697 aa)
	IFT122	Intraflagellar transport 122. (1285 aa)
	TOPORS	TOP1 binding arginine/serine rich protein. (1052 aa)
	FAM161A	Uncharacterized protein. (643 aa)
	RPGRIP1L	RPGRIP1 like. (1313 aa)
	TBCC	Tubulin folding cofactor C. (359 aa)
	SPATA7	Spermatogenesis associated 7. (598 aa)
	NPHP4	Nephrocystin 4. (1426 aa)
	RPGRIP1	RPGR interacting protein 1. (1123 aa)
	TMEM237	Transmembrane protein 237. (407 aa)
	NPHP1	Nephrocystin 1. (698 aa)
	CEP290	Centrosomal protein 290. (2482 aa)
	KIFAP3	Kinesin associated protein 3. (803 aa)
	IFT20	Intraflagellar transport 20. (141 aa)
	TTC8	Tetratricopeptide repeat domain 8. (531 aa)
	IFT140	Intraflagellar transport 140. (1470 aa)
	PCDHB15	Protocadherin beta 15. (593 aa)
	IFT57	Intraflagellar transport 57. (428 aa)
	BBS4	Bardet-Biedl syndrome 4. (519 aa)
	USH2A	Usherin. (5201 aa)
	WHRN	Whirlin. (907 aa)
	MAK	Male germ cell associated kinase. (624 aa)
	KIAA1549	KIAA1549. (1901 aa)
	CFAP410	Cilia and flagella associated protein 410. (325 aa)
	IFT52	Intraflagellar transport 52. (420 aa)
	SPTBN5	Spectrin beta, non-erythrocytic 5. (3701 aa)
	TSGA10IP	Testis specific 10 interacting protein. (558 aa)
	RP1	RP1 axonemal microtubule associated. (2151 aa)
	IQCB1	IQ motif containing B1. (598 aa)
	ARL3	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family. (182 aa)

Your Current Organism:

Colobus angolensis

NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL3	IFT122	ENSCANP00000038124	ENSCANP00000011453	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 122.	0.466
ARL3	IFT140	ENSCANP00000038124	ENSCANP00000027534	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 140.	0.416
ARL3	IFT20	ENSCANP00000038124	ENSCANP00000024821	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 20.	0.683
ARL3	IFT57	ENSCANP00000038124	ENSCANP00000029912	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport 57.	0.628
ARL3	IQCB1	ENSCANP00000038124	ENSCANP00000037971	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	IQ motif containing B1.	0.400
ARL3	KIF17	ENSCANP00000038124	ENSCANP00000005208	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Kinesin family member 17; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.414
ARL3	NPHP1	ENSCANP00000038124	ENSCANP00000022292	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Nephrocystin 1.	0.420
ARL3	NPHP4	ENSCANP00000038124	ENSCANP00000019103	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Nephrocystin 4.	0.511
ARL3	RPGRIP1L	ENSCANP00000038124	ENSCANP00000014625	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	RPGRIP1 like.	0.439
ARL3	TBCC	ENSCANP00000038124	ENSCANP00000015531	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Tubulin folding cofactor C.	0.953
ARL3	WDR19	ENSCANP00000038124	ENSCANP00000007539	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	WD repeat domain 19.	0.422
BBS4	CEP290	ENSCANP00000030802	ENSCANP00000022674	Bardet-Biedl syndrome 4.	Centrosomal protein 290.	0.615
BBS4	IFT122	ENSCANP00000030802	ENSCANP00000011453	Bardet-Biedl syndrome 4.	Intraflagellar transport 122.	0.596
BBS4	IFT140	ENSCANP00000030802	ENSCANP00000027534	Bardet-Biedl syndrome 4.	Intraflagellar transport 140.	0.589
BBS4	IFT20	ENSCANP00000030802	ENSCANP00000024821	Bardet-Biedl syndrome 4.	Intraflagellar transport 20.	0.635
BBS4	IFT52	ENSCANP00000030802	ENSCANP00000033685	Bardet-Biedl syndrome 4.	Intraflagellar transport 52.	0.675
BBS4	IFT57	ENSCANP00000030802	ENSCANP00000029912	Bardet-Biedl syndrome 4.	Intraflagellar transport 57.	0.719
BBS4	NPHP1	ENSCANP00000030802	ENSCANP00000022292	Bardet-Biedl syndrome 4.	Nephrocystin 1.	0.526
BBS4	NPHP4	ENSCANP00000030802	ENSCANP00000019103	Bardet-Biedl syndrome 4.	Nephrocystin 4.	0.457
BBS4	RPGRIP1L	ENSCANP00000030802	ENSCANP00000014625	Bardet-Biedl syndrome 4.	RPGRIP1 like.	0.483