STRINGSTRING
PATL1 PATL1 ENSCANP00000031207 ENSCANP00000031207 ATXN2 ATXN2 DDX6 DDX6 CNOT7 CNOT7 LSM4 LSM4 C19orf54 C19orf54 LSM14A LSM14A EIF4ENIF1 EIF4ENIF1 NOCT NOCT RC3H1 RC3H1 LOC105514134 LOC105514134 LOC105512634 LOC105512634 LIMD1 LIMD1 LSM3 LSM3 DYNC1H1 DYNC1H1 LOC105523217 LOC105523217 PATL2 PATL2 LSM3-2 LSM3-2 LSM3-3 LSM3-3 LSM3-4 LSM3-4 ENSCANP00000030698 ENSCANP00000030698
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PATL1PAT1 homolog 1, processing body mRNA decay factor. (770 aa)
ENSCANP00000031207Uncharacterized protein. (457 aa)
ATXN2Ataxin 2. (1073 aa)
DDX6DEAD-box helicase 6; Belongs to the DEAD box helicase family. (434 aa)
CNOT7CCR4-NOT transcription complex subunit 7. (285 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
C19orf54Chromosome 19 open reading frame 54. (351 aa)
LSM14AUncharacterized protein. (471 aa)
EIF4ENIF1Eukaryotic translation initiation factor 4E nuclear import factor 1. (973 aa)
NOCTEndo/exonuclease/phosphatase domain-containing protein. (431 aa)
RC3H1Ring finger and CCCH-type domains 1. (1134 aa)
LOC105514134Uncharacterized protein. (457 aa)
LOC105512634Uncharacterized protein. (231 aa)
LIMD1LIM domains containing 1. (677 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
DYNC1H1Dynein cytoplasmic 1 heavy chain 1. (4598 aa)
LOC105523217Uncharacterized protein. (458 aa)
PATL2PAT1 homolog 2. (538 aa)
LSM3-2U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (87 aa)
LSM3-3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
LSM3-4U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
ENSCANP00000030698Endo/exonuclease/phosphatase domain-containing protein. (355 aa)
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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