STRINGSTRING
SNRPG SNRPG SNRPD2 SNRPD2 SF3B5 SF3B5 PRPF4 PRPF4 SNRPF SNRPF LOC105517174 LOC105517174 CWC22 CWC22 LSM3-2 LSM3-2 SNRPD2-2 SNRPD2-2 LSM3-3 LSM3-3 SNRPB SNRPB SF3A2 SF3A2 EFTUD2 EFTUD2 PRPF38B PRPF38B C19orf54 C19orf54 ENSCANP00000008832 ENSCANP00000008832 ENSCANP00000010049 ENSCANP00000010049 CWC27 CWC27 SF3B1 SF3B1 PRPF31 PRPF31 SF3B6 SF3B6 SNRPD3 SNRPD3 PHF5A PHF5A ENSCANP00000017388 ENSCANP00000017388 SNRPA1 SNRPA1 ENSCANP00000017579 ENSCANP00000017579 ENSCANP00000017774 ENSCANP00000017774 RBMX2 RBMX2 PRPF38A PRPF38A SF3A1 SF3A1 LSM3 LSM3 WBP4 WBP4 SNRNP200 SNRNP200 ENSCANP00000023614 ENSCANP00000023614 SNU13 SNU13 LSM7 LSM7 ENSCANP00000024333 ENSCANP00000024333 SF3B4 SF3B4 SNRPD2-3 SNRPD2-3 SNRPE SNRPE SNRPB2 SNRPB2 PRPF3 PRPF3 MFAP1 MFAP1 ENSCANP00000027926 ENSCANP00000027926 RNF113A RNF113A LSM3-4 LSM3-4 PRPF6 PRPF6 SMU1 SMU1 ENSCANP00000029739 ENSCANP00000029739 LOC105525000 LOC105525000 ZMAT2 ZMAT2 LSM2 LSM2 TXNL4A TXNL4A SF3B2 SF3B2 SNIP1 SNIP1 LSM5 LSM5 ENSCANP00000033208 ENSCANP00000033208 LSM8 LSM8 ENSCANP00000034448 ENSCANP00000034448 LSM6 LSM6 RNF113B RNF113B SF3A3 SF3A3 ENSCANP00000037401 ENSCANP00000037401 BUD13 BUD13 SF3B3 SF3B3 PRPF8 PRPF8 SART1 SART1 LSM4 LSM4 ENSCANP00000040051 ENSCANP00000040051 DHX16 DHX16
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (96 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (54 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
PRPF4Pre-mRNA processing factor 4. (539 aa)
SNRPFSm domain-containing protein. (127 aa)
LOC105517174Sm domain-containing protein. (80 aa)
CWC22CWC22 spliceosome associated protein homolog. (907 aa)
LSM3-2U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (87 aa)
SNRPD2-2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (59 aa)
LSM3-3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
SF3A2Splicing factor 3a subunit 2. (464 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (972 aa)
PRPF38BPre-mRNA processing factor 38B. (546 aa)
C19orf54Chromosome 19 open reading frame 54. (351 aa)
ENSCANP00000008832Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (63 aa)
ENSCANP00000010049Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (70 aa)
CWC27CWC27 spliceosome associated cyclophilin. (473 aa)
SF3B1Splicing factor 3b subunit 1. (1307 aa)
PRPF31Pre-mRNA processing factor 31. (499 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
PHF5APHD finger protein 5A. (110 aa)
ENSCANP00000017388RRM domain-containing protein. (85 aa)
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (255 aa)
ENSCANP00000017579SEC63 domain-containing protein. (264 aa)
ENSCANP00000017774Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (63 aa)
RBMX2RNA binding motif protein X-linked 2. (327 aa)
PRPF38APre-mRNA processing factor 38A. (299 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
WBP4WW domain binding protein 4. (376 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2055 aa)
ENSCANP00000023614Sm domain-containing protein. (71 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (163 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
ENSCANP00000024333Uncharacterized protein. (424 aa)
SF3B4Splicing factor 3b subunit 4. (424 aa)
SNRPD2-3Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (101 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
PRPF3Pre-mRNA processing factor 3. (681 aa)
MFAP1Microfibril associated protein 1. (439 aa)
ENSCANP00000027926Uncharacterized protein. (61 aa)
RNF113ARing finger protein 113A. (343 aa)
LSM3-4U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
PRPF6Pre-mRNA processing factor 6. (941 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (499 aa)
ENSCANP00000029739Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (87 aa)
LOC105525000Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
ZMAT2Zinc finger matrin-type 2. (199 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
SF3B2Splicing factor 3b subunit 2. (895 aa)
SNIP1Smad nuclear interacting protein 1. (396 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
ENSCANP00000033208RRM domain-containing protein. (317 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
ENSCANP00000034448RED_C domain-containing protein. (146 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
RNF113BRing finger protein 113B. (319 aa)
SF3A3Splicing factor 3a subunit 3. (504 aa)
ENSCANP00000037401Uncharacterized protein. (53 aa)
BUD13BUD13 homolog. (606 aa)
SF3B3Splicing factor 3b subunit 3. (1195 aa)
PRPF8Pre-mRNA processing factor 8. (2335 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (752 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
ENSCANP00000040051Sm domain-containing protein. (54 aa)
DHX16DEAH-box helicase 16. (1044 aa)
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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