15 items (Colobus angolensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EDC3	Enhancer of mRNA decapping 3. (508 aa)
	DCPS	Decapping enzyme, scavenger. (339 aa)
	NOCT	Endo/exonuclease/phosphatase domain-containing protein. (431 aa)
	CNOT7	CCR4-NOT transcription complex subunit 7. (285 aa)
	EDC4	Enhancer of mRNA decapping 4. (1398 aa)
	PATL1	PAT1 homolog 1, processing body mRNA decay factor. (770 aa)
	ENSCANP00000030698	Endo/exonuclease/phosphatase domain-containing protein. (355 aa)
	ENSCANP00000026116	Uncharacterized protein. (130 aa)
	DCP1B	Decapping mRNA 1B. (616 aa)
	LOC105512634	Uncharacterized protein. (231 aa)
	DCP1A	Decapping mRNA 1A. (582 aa)
	PATL2	PAT1 homolog 2. (538 aa)
	LSM1	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. (133 aa)
	NUDT12	Nudix hydrolase 12. (462 aa)
	DCP2	Decapping mRNA 2. (420 aa)

Your Current Organism:

Colobus angolensis

NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNOT7	DCP1A	ENSCANP00000039543	ENSCANP00000000541	CCR4-NOT transcription complex subunit 7.	Decapping mRNA 1A.	0.454
CNOT7	DCP2	ENSCANP00000039543	ENSCANP00000013677	CCR4-NOT transcription complex subunit 7.	Decapping mRNA 2.	0.926
CNOT7	ENSCANP00000030698	ENSCANP00000039543	ENSCANP00000030698	CCR4-NOT transcription complex subunit 7.	Endo/exonuclease/phosphatase domain-containing protein.	0.727
CNOT7	NOCT	ENSCANP00000039543	ENSCANP00000017001	CCR4-NOT transcription complex subunit 7.	Endo/exonuclease/phosphatase domain-containing protein.	0.727
CNOT7	PATL1	ENSCANP00000039543	ENSCANP00000031167	CCR4-NOT transcription complex subunit 7.	PAT1 homolog 1, processing body mRNA decay factor.	0.938
CNOT7	PATL2	ENSCANP00000039543	ENSCANP00000003940	CCR4-NOT transcription complex subunit 7.	PAT1 homolog 2.	0.804
DCP1A	CNOT7	ENSCANP00000000541	ENSCANP00000039543	Decapping mRNA 1A.	CCR4-NOT transcription complex subunit 7.	0.454
DCP1A	DCP1B	ENSCANP00000000541	ENSCANP00000025190	Decapping mRNA 1A.	Decapping mRNA 1B.	0.965
DCP1A	DCP2	ENSCANP00000000541	ENSCANP00000013677	Decapping mRNA 1A.	Decapping mRNA 2.	0.986
DCP1A	DCPS	ENSCANP00000000541	ENSCANP00000016776	Decapping mRNA 1A.	Decapping enzyme, scavenger.	0.408
DCP1A	EDC3	ENSCANP00000000541	ENSCANP00000010597	Decapping mRNA 1A.	Enhancer of mRNA decapping 3.	0.985
DCP1A	EDC4	ENSCANP00000000541	ENSCANP00000035929	Decapping mRNA 1A.	Enhancer of mRNA decapping 4.	0.980
DCP1A	ENSCANP00000026116	ENSCANP00000000541	ENSCANP00000026116	Decapping mRNA 1A.	Uncharacterized protein.	0.972
DCP1A	LOC105512634	ENSCANP00000000541	ENSCANP00000018560	Decapping mRNA 1A.	Uncharacterized protein.	0.454
DCP1A	LSM1	ENSCANP00000000541	ENSCANP00000005651	Decapping mRNA 1A.	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	0.820
DCP1A	PATL1	ENSCANP00000000541	ENSCANP00000031167	Decapping mRNA 1A.	PAT1 homolog 1, processing body mRNA decay factor.	0.972
DCP1A	PATL2	ENSCANP00000000541	ENSCANP00000003940	Decapping mRNA 1A.	PAT1 homolog 2.	0.935
DCP1B	DCP1A	ENSCANP00000025190	ENSCANP00000000541	Decapping mRNA 1B.	Decapping mRNA 1A.	0.965
DCP1B	DCP2	ENSCANP00000025190	ENSCANP00000013677	Decapping mRNA 1B.	Decapping mRNA 2.	0.979
DCP1B	DCPS	ENSCANP00000025190	ENSCANP00000016776	Decapping mRNA 1B.	Decapping enzyme, scavenger.	0.552