(67 nodes) Kelch-type beta propeller network (Colobus angolensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KLHL4	Kelch like family member 4. (720 aa)
	KLHL28	Kelch like family member 28. (585 aa)
	KLHL2	Kelch like family member 2. (632 aa)
	KLHDC10	Kelch domain containing 10. (442 aa)
	KLHL15	Kelch like family member 15. (604 aa)
	KBTBD12	Kelch repeat and BTB domain containing 12. (623 aa)
	ATRN	Attractin. (1408 aa)
	KLHL32	Kelch like family member 32. (622 aa)
	KBTBD3	Kelch repeat and BTB domain containing 3. (612 aa)
	KLHL24	Kelch like family member 24. (600 aa)
	KLHL31	Kelch like family member 31. (634 aa)
	KLHL22	Kelch like family member 22. (634 aa)
	KLHDC1	Kelch domain containing 1. (387 aa)
	KLHDC3	Kelch domain containing 3. (389 aa)
	KLHL29	Kelch like family member 29. (875 aa)
	GAN	Gigaxonin. (597 aa)
	KLHL33	Kelch like family member 33. (797 aa)
	KLHL12	BTB domain-containing protein. (568 aa)
	KBTBD4	Kelch repeat and BTB domain containing 4. (534 aa)
	KLHDC2	Kelch domain containing 2. (406 aa)
	KLHDC8A	Kelch domain containing 8A. (350 aa)
	FBXO42	F-box protein 42. (716 aa)
	KBTBD2	Kelch repeat and BTB domain containing 2. (623 aa)
	LZTR1	Leucine zipper like transcription regulator 1. (840 aa)
	KLHL21	Uncharacterized protein. (230 aa)
	KLHL1	Kelch like family member 1. (748 aa)
	ENC1	Ectodermal-neural cortex 1. (589 aa)
	IPP	Intracisternal A particle-promoted polypeptide. (584 aa)
	KLHL34	Kelch like family member 34. (645 aa)
	KLHL20	Kelch like family member 20. (609 aa)
	KLHL18	Kelch like family member 18. (483 aa)
	KLHL10	Kelch like family member 10. (608 aa)
	KLHL3	Kelch like family member 3. (597 aa)
	KLHL13	Kelch like family member 13. (658 aa)
	KLHL23	Kelch like family member 23. (558 aa)
	KLHL41	Kelch like family member 41. (606 aa)
	KBTBD7	Kelch repeat and BTB domain containing 7. (684 aa)
	KLHL25	Kelch like family member 25. (589 aa)
	KBTBD6	Kelch repeat and BTB domain containing 6. (674 aa)
	KLHL38	Kelch like family member 38. (581 aa)
	MEGF8	Multiple EGF like domains 8. (2837 aa)
	HCFC2	Host cell factor C2. (676 aa)
	IVNS1ABP	Influenza virus NS1A binding protein. (642 aa)
	KLHL9	Kelch like family member 9. (612 aa)
	KEAP1	Kelch like ECH associated protein 1. (624 aa)
	KLHL26	Kelch like family member 26. (615 aa)
	RABEPK	Rab9 effector protein with kelch motifs. (372 aa)
	RAG2	Recombination activating 2. (527 aa)
	KLHL36	Kelch like family member 36. (616 aa)
	KLHDC9	Kelch domain containing 9. (289 aa)
	KLHL42	Kelch like family member 42. (492 aa)
	KLHL5	Kelch like family member 5. (755 aa)
	KLHL6	Kelch like family member 6. (621 aa)
	KLHL30	Kelch like family member 30. (578 aa)
	KLHDC4	Kelch domain containing 4. (522 aa)
	KLHL40	Kelch like family member 40. (621 aa)
	KLHDC8B	Kelch domain containing 8B. (354 aa)
	KLHL11	Kelch like family member 11. (706 aa)
	KLHL8	Kelch like family member 8. (620 aa)
	KLHL7	Kelch like family member 7. (538 aa)
	KLHL35	Kelch like family member 35. (301 aa)
	ATRNL1	Attractin like 1. (1378 aa)
	MKLN1	Muskelin 1. (739 aa)
	KLHL14	Kelch like family member 14. (506 aa)
	KBTBD8	Kelch repeat and BTB domain containing 8. (601 aa)
	HCFC1	Host cell factor C1. (2080 aa)
	KLHL17	Kelch like family member 17. (595 aa)

Your Current Organism:

Colobus angolensis

NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENC1	GAN	ENSCANP00000006748	ENSCANP00000013913	Ectodermal-neural cortex 1.	Gigaxonin.	0.652
ENC1	KBTBD6	ENSCANP00000006748	ENSCANP00000002068	Ectodermal-neural cortex 1.	Kelch repeat and BTB domain containing 6.	0.550
ENC1	KBTBD7	ENSCANP00000006748	ENSCANP00000002662	Ectodermal-neural cortex 1.	Kelch repeat and BTB domain containing 7.	0.550
ENC1	KBTBD8	ENSCANP00000006748	ENSCANP00000015967	Ectodermal-neural cortex 1.	Kelch repeat and BTB domain containing 8.	0.700
ENC1	KEAP1	ENSCANP00000006748	ENSCANP00000037276	Ectodermal-neural cortex 1.	Kelch like ECH associated protein 1.	0.548
ENC1	KLHL11	ENSCANP00000006748	ENSCANP00000030521	Ectodermal-neural cortex 1.	Kelch like family member 11.	0.451
ENC1	KLHL12	ENSCANP00000006748	ENSCANP00000013571	Ectodermal-neural cortex 1.	BTB domain-containing protein.	0.527
ENC1	KLHL13	ENSCANP00000006748	ENSCANP00000004171	Ectodermal-neural cortex 1.	Kelch like family member 13.	0.593
ENC1	KLHL2	ENSCANP00000006748	ENSCANP00000018708	Ectodermal-neural cortex 1.	Kelch like family member 2.	0.551
ENC1	KLHL20	ENSCANP00000006748	ENSCANP00000004910	Ectodermal-neural cortex 1.	Kelch like family member 20.	0.638
ENC1	KLHL21	ENSCANP00000006748	ENSCANP00000007885	Ectodermal-neural cortex 1.	Uncharacterized protein.	0.433
ENC1	KLHL22	ENSCANP00000006748	ENSCANP00000023678	Ectodermal-neural cortex 1.	Kelch like family member 22.	0.638
ENC1	KLHL24	ENSCANP00000006748	ENSCANP00000022839	Ectodermal-neural cortex 1.	Kelch like family member 24.	0.437
ENC1	KLHL25	ENSCANP00000006748	ENSCANP00000002311	Ectodermal-neural cortex 1.	Kelch like family member 25.	0.756
ENC1	KLHL3	ENSCANP00000006748	ENSCANP00000004337	Ectodermal-neural cortex 1.	Kelch like family member 3.	0.549
ENC1	KLHL41	ENSCANP00000006748	ENSCANP00000003576	Ectodermal-neural cortex 1.	Kelch like family member 41.	0.604
ENC1	KLHL42	ENSCANP00000006748	ENSCANP00000035267	Ectodermal-neural cortex 1.	Kelch like family member 42.	0.593
ENC1	KLHL7	ENSCANP00000006748	ENSCANP00000029392	Ectodermal-neural cortex 1.	Kelch like family member 7.	0.508
ENC1	KLHL8	ENSCANP00000006748	ENSCANP00000029838	Ectodermal-neural cortex 1.	Kelch like family member 8.	0.556
ENC1	KLHL9	ENSCANP00000006748	ENSCANP00000038500	Ectodermal-neural cortex 1.	Kelch like family member 9.	0.608