STRINGSTRING
DCP1A DCP1A LOC105517174 LOC105517174 DIS3 DIS3 ENSCANP00000003829 ENSCANP00000003829 PATL2 PATL2 CNOT3 CNOT3 EIF4A1 EIF4A1 LRRC27 LRRC27 LSM3-2 LSM3-2 PAN2 PAN2 LSM3-3 LSM3-3 LSM1 LSM1 ENSCANP00000005801 ENSCANP00000005801 CNOT9 CNOT9 PABPC1 PABPC1 ENSCANP00000007202 ENSCANP00000007202 CNOT6 CNOT6 EIF4B EIF4B C19orf54 C19orf54 ENSCANP00000009286 ENSCANP00000009286 CNOT6L CNOT6L EDC3 EDC3 PARN PARN ENSCANP00000011816 ENSCANP00000011816 ENSCANP00000011836 ENSCANP00000011836 CNOT4 CNOT4 TTC37 TTC37 ENSCANP00000012626 ENSCANP00000012626 DCP2 DCP2 WDR61 WDR61 CNOT10 CNOT10 EIF4E1B EIF4E1B HBS1L HBS1L DCPS DCPS ENSCANP00000017240 ENSCANP00000017240 HIGD1B HIGD1B LOC105512634 LOC105512634 PAN3 PAN3 ENSCANP00000020120 ENSCANP00000020120 TMC4 TMC4 EIF4G1 EIF4G1 LSM3 LSM3 EXOSC1 EXOSC1 LOC105500816 LOC105500816 PABPC4 PABPC4 PAIP1 PAIP1 ENSCANP00000023614 ENSCANP00000023614 LSM7 LSM7 MTPAP MTPAP EXOSC4 EXOSC4 ENSCANP00000024716 ENSCANP00000024716 TUT7 TUT7 DCP1B DCP1B ENSCANP00000025588 ENSCANP00000025588 EIF4A2 EIF4A2 TUT4 TUT4 NT5C3B NT5C3B DIS3L2 DIS3L2 EXOSC3 EXOSC3 ENSCANP00000027990 ENSCANP00000027990 EXOSC9 EXOSC9 TOE1 TOE1 PABPC1L PABPC1L EIF4E EIF4E LOC105508167 LOC105508167 XRN1 XRN1 PABPC4L PABPC4L CNOT2 CNOT2 LSM3-4 LSM3-4 ENSCANP00000029101 ENSCANP00000029101 CNOT11 CNOT11 PATL1 PATL1 EXOSC5 EXOSC5 LSM2 LSM2 SKIV2L SKIV2L EXOSC2 EXOSC2 LSM5 LSM5 EXOSC8 EXOSC8 ENSCANP00000034025 ENSCANP00000034025 KIFBP KIFBP TNKS1BP1 TNKS1BP1 ENSCANP00000034583 ENSCANP00000034583 CNOT1 CNOT1 LSM6 LSM6 DIS3L DIS3L EDC4 EDC4 PABPC3 PABPC3 EXOSC7 EXOSC7 TMC7 TMC7 DDX6 DDX6 ENSCANP00000038545 ENSCANP00000038545 PNLDC1 PNLDC1 TUT1 TUT1 ENSCANP00000039236 ENSCANP00000039236 ENSCANP00000039472 ENSCANP00000039472 CNOT7 CNOT7 EIF4A3 EIF4A3 CNOT8 CNOT8 LSM4 LSM4 TENT2 TENT2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DCP1ADecapping mRNA 1A. (582 aa)
LOC105517174Sm domain-containing protein. (80 aa)
DIS3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (958 aa)
ENSCANP00000003829PABC domain-containing protein. (284 aa)
PATL2PAT1 homolog 2. (538 aa)
CNOT3CCR4-NOT transcription complex subunit 3. (751 aa)
EIF4A1Uncharacterized protein; Belongs to the DEAD box helicase family. (406 aa)
LRRC27Leucine rich repeat containing 27. (529 aa)
LSM3-2U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (87 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1187 aa)
LSM3-3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. (133 aa)
ENSCANP00000005801Uncharacterized protein. (314 aa)
CNOT9CCR4-NOT transcription complex subunit 9. (318 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (640 aa)
ENSCANP00000007202R3H domain-containing protein. (192 aa)
CNOT6CCR4-NOT transcription complex subunit 6. (557 aa)
EIF4BRRM domain-containing protein. (616 aa)
C19orf54Chromosome 19 open reading frame 54. (351 aa)
ENSCANP00000009286Uncharacterized protein. (71 aa)
CNOT6LCCR4-NOT transcription complex subunit 6 like. (559 aa)
EDC3Enhancer of mRNA decapping 3. (508 aa)
PARNPoly(A)-specific ribonuclease. (620 aa)
ENSCANP00000011816Uncharacterized protein. (560 aa)
ENSCANP00000011836Uncharacterized protein. (288 aa)
CNOT4CCR4-NOT transcription complex subunit 4. (713 aa)
TTC37Tetratricopeptide repeat domain 37. (1563 aa)
ENSCANP00000012626Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (109 aa)
DCP2Decapping mRNA 2. (420 aa)
WDR61WD repeat domain 61. (305 aa)
CNOT10CCR4-NOT transcription complex subunit 10. (650 aa)
EIF4E1BEukaryotic translation initiation factor 4E family member 1B; Belongs to the eukaryotic initiation factor 4E family. (244 aa)
HBS1LHBS1 like translational GTPase. (698 aa)
DCPSDecapping enzyme, scavenger. (339 aa)
ENSCANP00000017240Uncharacterized protein. (91 aa)
HIGD1BHIG1 hypoxia inducible domain family member 1B. (99 aa)
LOC105512634Uncharacterized protein. (231 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (855 aa)
ENSCANP00000020120RRM domain-containing protein. (189 aa)
TMC4Transmembrane channel-like protein. (680 aa)
EIF4G1Eukaryotic translation initiation factor 4 gamma 1. (1599 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
EXOSC1Exosome component 1. (195 aa)
LOC105500816Uncharacterized protein. (253 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (651 aa)
PAIP1Poly(A) binding protein interacting protein 1. (367 aa)
ENSCANP00000023614Sm domain-containing protein. (71 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
MTPAPMitochondrial poly(A) polymerase. (582 aa)
EXOSC4Exosome component 4. (245 aa)
ENSCANP00000024716RRM domain-containing protein. (226 aa)
TUT7Terminal uridylyl transferase 7. (1490 aa)
DCP1BDecapping mRNA 1B. (616 aa)
ENSCANP00000025588Uncharacterized protein. (242 aa)
EIF4A2Uncharacterized protein; Belongs to the DEAD box helicase family. (407 aa)
TUT4Terminal uridylyl transferase 4. (1649 aa)
NT5C3B5'-nucleotidase; Belongs to the pyrimidine 5'-nucleotidase family. (300 aa)
DIS3L2DIS3 like 3'-5' exoribonuclease 2; Belongs to the RNR ribonuclease family. (831 aa)
EXOSC3Exosome component 3. (275 aa)
ENSCANP00000027990Uncharacterized protein. (385 aa)
EXOSC9Exosome component 9. (456 aa)
TOE1Target of EGR1, exonuclease. (524 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (612 aa)
EIF4EEukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (245 aa)
LOC105508167RRM domain-containing protein. (578 aa)
XRN15'-3' exoribonuclease 1. (1706 aa)
PABPC4LPoly(A) binding protein cytoplasmic 4 like. (370 aa)
CNOT2CCR4-NOT transcription complex subunit 2. (540 aa)
LSM3-4U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
ENSCANP00000029101Uncharacterized protein. (233 aa)
CNOT11CCR4-NOT transcription complex subunit 11. (451 aa)
PATL1PAT1 homolog 1, processing body mRNA decay factor. (770 aa)
EXOSC5Exosome component 5. (235 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
SKIV2LSki2 like RNA helicase. (1245 aa)
EXOSC2Uncharacterized protein. (293 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
EXOSC8Exosome component 8. (276 aa)
ENSCANP00000034025Uncharacterized protein. (93 aa)
KIFBPKIF1 binding protein. (557 aa)
TNKS1BP1Tankyrase 1 binding protein 1. (1668 aa)
ENSCANP00000034583Uncharacterized protein. (192 aa)
CNOT1CCR4-NOT transcription complex subunit 1. (2382 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
DIS3LDIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1061 aa)
EDC4Enhancer of mRNA decapping 4. (1398 aa)
PABPC3Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (630 aa)
EXOSC7Exosome component 7. (291 aa)
TMC7Transmembrane channel-like protein. (682 aa)
DDX6DEAD-box helicase 6; Belongs to the DEAD box helicase family. (434 aa)
ENSCANP00000038545RRM domain-containing protein. (523 aa)
PNLDC1PARN like, ribonuclease domain containing 1. (520 aa)
TUT1RRM domain-containing protein. (916 aa)
ENSCANP00000039236RRM domain-containing protein. (542 aa)
ENSCANP00000039472Uncharacterized protein; Belongs to the DEAD box helicase family. (381 aa)
CNOT7CCR4-NOT transcription complex subunit 7. (285 aa)
EIF4A3Eukaryotic translation initiation factor 4A3. (362 aa)
CNOT8CCR4-NOT transcription complex subunit 8. (292 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
TENT2Terminal nucleotidyltransferase 2. (441 aa)
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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