21 items (Colobus angolensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DCP1A	Decapping mRNA 1A. (582 aa)
	TNPO1	Transportin 1. (898 aa)
	DIS3	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (958 aa)
	ZFP36	ZFP36 ring finger protein. (332 aa)
	YWHAB	Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta; Belongs to the 14-3-3 family. (246 aa)
	TNPO2	Transportin 2. (895 aa)
	ENSCANP00000011836	Uncharacterized protein. (288 aa)
	DCP2	Decapping mRNA 2. (420 aa)
	ENSCANP00000018449	Uncharacterized protein. (223 aa)
	EXOSC1	Exosome component 1. (195 aa)
	EXOSC4	Exosome component 4. (245 aa)
	DIS3L2	DIS3 like 3'-5' exoribonuclease 2; Belongs to the RNR ribonuclease family. (831 aa)
	EXOSC3	Exosome component 3. (275 aa)
	EXOSC9	Exosome component 9. (456 aa)
	XRN1	5'-3' exoribonuclease 1. (1706 aa)
	EXOSC5	Exosome component 5. (235 aa)
	EXOSC2	Uncharacterized protein. (293 aa)
	EXOSC8	Exosome component 8. (276 aa)
	MAPKAPK2	MAPK activated protein kinase 2; Belongs to the protein kinase superfamily. (431 aa)
	DIS3L	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1061 aa)
	EXOSC7	Exosome component 7. (291 aa)

Your Current Organism:

Colobus angolensis

NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCP1A	DCP2	ENSCANP00000000541	ENSCANP00000013677	Decapping mRNA 1A.	Decapping mRNA 2.	0.986
DCP1A	DIS3	ENSCANP00000000541	ENSCANP00000002806	Decapping mRNA 1A.	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	0.665
DCP1A	DIS3L	ENSCANP00000000541	ENSCANP00000035758	Decapping mRNA 1A.	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	0.612
DCP1A	DIS3L2	ENSCANP00000000541	ENSCANP00000026023	Decapping mRNA 1A.	DIS3 like 3'-5' exoribonuclease 2; Belongs to the RNR ribonuclease family.	0.612
DCP1A	ENSCANP00000011836	ENSCANP00000000541	ENSCANP00000011836	Decapping mRNA 1A.	Uncharacterized protein.	0.634
DCP1A	EXOSC1	ENSCANP00000000541	ENSCANP00000021487	Decapping mRNA 1A.	Exosome component 1.	0.666
DCP1A	EXOSC2	ENSCANP00000000541	ENSCANP00000032348	Decapping mRNA 1A.	Uncharacterized protein.	0.634
DCP1A	EXOSC3	ENSCANP00000000541	ENSCANP00000026595	Decapping mRNA 1A.	Exosome component 3.	0.668
DCP1A	EXOSC4	ENSCANP00000000541	ENSCANP00000024670	Decapping mRNA 1A.	Exosome component 4.	0.730
DCP1A	EXOSC5	ENSCANP00000000541	ENSCANP00000031321	Decapping mRNA 1A.	Exosome component 5.	0.730
DCP1A	EXOSC9	ENSCANP00000000541	ENSCANP00000028171	Decapping mRNA 1A.	Exosome component 9.	0.668
DCP1A	XRN1	ENSCANP00000000541	ENSCANP00000028346	Decapping mRNA 1A.	5'-3' exoribonuclease 1.	0.993
DCP1A	ZFP36	ENSCANP00000000541	ENSCANP00000002872	Decapping mRNA 1A.	ZFP36 ring finger protein.	0.602
DCP2	DCP1A	ENSCANP00000013677	ENSCANP00000000541	Decapping mRNA 2.	Decapping mRNA 1A.	0.986
DCP2	DIS3	ENSCANP00000013677	ENSCANP00000002806	Decapping mRNA 2.	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	0.761
DCP2	DIS3L	ENSCANP00000013677	ENSCANP00000035758	Decapping mRNA 2.	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	0.729
DCP2	DIS3L2	ENSCANP00000013677	ENSCANP00000026023	Decapping mRNA 2.	DIS3 like 3'-5' exoribonuclease 2; Belongs to the RNR ribonuclease family.	0.729
DCP2	ENSCANP00000011836	ENSCANP00000013677	ENSCANP00000011836	Decapping mRNA 2.	Uncharacterized protein.	0.739
DCP2	EXOSC1	ENSCANP00000013677	ENSCANP00000021487	Decapping mRNA 2.	Exosome component 1.	0.768
DCP2	EXOSC2	ENSCANP00000013677	ENSCANP00000032348	Decapping mRNA 2.	Uncharacterized protein.	0.739