STRINGSTRING
NUP88 NUP88 ENSCANP00000000105 ENSCANP00000000105 LOC105526741 LOC105526741 H3C13 H3C13 ENSCANP00000000858 ENSCANP00000000858 ENSCANP00000000860 ENSCANP00000000860 H2BC15 H2BC15 LOC105524378 LOC105524378 ENSCANP00000001018 ENSCANP00000001018 LOC105507484 LOC105507484 ENSCANP00000001382 ENSCANP00000001382 H2AC7 H2AC7 H2AC6 H2AC6 LOC105520452 LOC105520452 LOC105526741-2 LOC105526741-2 LOC105503451 LOC105503451 H2BC5 H2BC5 LOC105526735 LOC105526735 H2AJ H2AJ LOC105526736 LOC105526736 ENSCANP00000002473 ENSCANP00000002473 LOC105510607 LOC105510607 ENSCANP00000002558 ENSCANP00000002558 H2AX H2AX LOC105507268 LOC105507268 ENSCANP00000002791 ENSCANP00000002791 LOC105526734 LOC105526734 LOC105513874 LOC105513874 LOC105513882 LOC105513882 LOC105526741-3 LOC105526741-3 POLR2A POLR2A LOC105526737 LOC105526737 LOC105526740 LOC105526740 H2BC1 H2BC1 H2BC3 H2BC3 LOC105509399 LOC105509399 LOC105526741-4 LOC105526741-4 LOC105526748 LOC105526748 LOC105519951 LOC105519951 LOC105506127 LOC105506127 LOC105513873 LOC105513873 LOC105513886 LOC105513886 LOC105526755 LOC105526755 ENSCANP00000004360 ENSCANP00000004360 H2AZ2 H2AZ2 LOC105513883 LOC105513883 LOC105513905 LOC105513905 ENSCANP00000004484 ENSCANP00000004484 LOC105506722 LOC105506722 H2BC14 H2BC14 LOC105513908 LOC105513908 ENSCANP00000005619 ENSCANP00000005619 LOC105526750 LOC105526750 LOC105526752 LOC105526752 LOC105526753 LOC105526753 LOC105526757 LOC105526757 ENSCANP00000006424 ENSCANP00000006424 LOC105509188 LOC105509188 SHLD1 SHLD1 IPO8 IPO8 POLR2H POLR2H POLR2E POLR2E NUP58 NUP58 NUP98 NUP98 NUP37 NUP37 SEH1L SEH1L NUP35 NUP35 ENSCANP00000014925 ENSCANP00000014925 AGO2 AGO2 NUP214 NUP214 ENSCANP00000016230 ENSCANP00000016230 NUP155 NUP155 POLR2I POLR2I LOC105512667 LOC105512667 IPO7 IPO7 NUP160 NUP160 NUP133 NUP133 RAE1 RAE1 NUP153 NUP153 NUP62 NUP62 NUP43 NUP43 NUP50 NUP50 NUP93 NUP93 POLR2C POLR2C AAAS AAAS NUP54 NUP54 ENSCANP00000023391 ENSCANP00000023391 NUP62CL NUP62CL NUP210 NUP210 LOC105520302 LOC105520302 H2BU1 H2BU1 LOC105524985 LOC105524985 H2BC21 H2BC21 H2AC20 H2AC20 H3F3B H3F3B NUP107 NUP107 ENSCANP00000030439 ENSCANP00000030439 SEC13 SEC13 NUP210L NUP210L LOC105505861 LOC105505861 NUP205 NUP205 AGO1 AGO1 H3F3A H3F3A ENSCANP00000033684 ENSCANP00000033684 ENSCANP00000034865 ENSCANP00000034865 H2BW2 H2BW2 RANBP2 RANBP2 POLR2K POLR2K NDC1 NDC1 POLR2B POLR2B POLR2F POLR2F TPR TPR RAN RAN POLR2L POLR2L POLR2G POLR2G ADGRD1 ADGRD1 NUP188 NUP188 POLR2D POLR2D NUP42 NUP42 NUP85 NUP85
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NUP88Nucleoporin 88. (741 aa)
ENSCANP00000000105Histone H3; Belongs to the histone H3 family. (136 aa)
LOC105526741Histone H2B; Belongs to the histone H2B family. (126 aa)
H3C13Histone H3; Belongs to the histone H3 family. (136 aa)
ENSCANP00000000858Histone H2B; Belongs to the histone H2B family. (136 aa)
ENSCANP00000000860annotation not available (136 aa)
H2BC15Histone H2B; Belongs to the histone H2B family. (166 aa)
LOC105524378GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (202 aa)
ENSCANP00000001018annotation not available (136 aa)
LOC105507484GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
ENSCANP00000001382Histone H3; Belongs to the histone H3 family. (136 aa)
H2AC7Histone H2A; Belongs to the histone H2A family. (130 aa)
H2AC6Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC105520452Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC105526741-2Histone H2B type 1. (126 aa)
LOC105503451Uncharacterized protein. (1176 aa)
H2BC5Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105526735Histone H3.1. (136 aa)
H2AJHistone H2A; Belongs to the histone H2A family. (129 aa)
LOC105526736Histone H4. (103 aa)
ENSCANP00000002473Histone H2B; Belongs to the histone H2B family. (134 aa)
LOC105510607Histone H3; Belongs to the histone H3 family. (136 aa)
ENSCANP00000002558annotation not available (136 aa)
H2AXHistone H2A; Belongs to the histone H2A family. (143 aa)
LOC105507268Histone H3; Belongs to the histone H3 family. (136 aa)
ENSCANP00000002791Histone H2B; Belongs to the histone H2B family. (129 aa)
LOC105526734Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC105513874Histone H4. (103 aa)
LOC105513882Histone H4. (103 aa)
LOC105526741-3Histone H2B type 1. (126 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1986 aa)
LOC105526737Histone H4. (103 aa)
LOC105526740Histone H4. (103 aa)
H2BC1Histone H2B; Belongs to the histone H2B family. (127 aa)
H2BC3Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105509399Histone H3; Belongs to the histone H3 family. (135 aa)
LOC105526741-4Histone H2B type 1. (126 aa)
LOC105526748Histone H4. (103 aa)
LOC105519951Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105506127Histone H3; Belongs to the histone H3 family. (136 aa)
LOC105513873Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105513886Histone H3.1. (136 aa)
LOC105526755Histone H3.1. (136 aa)
ENSCANP00000004360annotation not available (136 aa)
H2AZ2Histone H2A; Belongs to the histone H2A family. (102 aa)
LOC105513883Histone H4. (103 aa)
LOC105513905Histone H4. (103 aa)
ENSCANP00000004484annotation not available (136 aa)
LOC105506722Histone H3; Belongs to the histone H3 family. (136 aa)
H2BC14Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105513908Histone H2B type 1-J. (126 aa)
ENSCANP00000005619annotation not available (136 aa)
LOC105526750Histone H3.1. (136 aa)
LOC105526752Histone H4. (103 aa)
LOC105526753Histone H2A type 1. (130 aa)
LOC105526757Histone H4. (103 aa)
ENSCANP00000006424annotation not available (103 aa)
LOC105509188Uncharacterized protein. (835 aa)
SHLD1Shieldin complex subunit 1. (205 aa)
IPO8Importin 8. (1031 aa)
POLR2HRNA polymerase II subunit H. (175 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
NUP58Nucleoporin 58. (553 aa)
NUP98Nucleoporin 98. (1800 aa)
NUP37Nucleoporin 37. (326 aa)
SEH1LSEH1 like nucleoporin; Belongs to the WD repeat SEC13 family. (337 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (326 aa)
ENSCANP00000014925Histone H2B; Belongs to the histone H2B family. (121 aa)
AGO2Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (875 aa)
NUP214Nucleoporin 214. (2089 aa)
ENSCANP00000016230Nup54 domain-containing protein. (119 aa)
NUP155Nucleoporin 155. (1369 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (105 aa)
LOC105512667Histone H2A; Belongs to the histone H2A family. (130 aa)
IPO7Importin 7. (952 aa)
NUP160Nucleoporin 160. (1362 aa)
NUP133Nucleoporin 133. (1146 aa)
RAE1Ribonucleic acid export 1. (368 aa)
NUP153Nucleoporin 153. (1442 aa)
NUP62Nucleoporin 62. (335 aa)
NUP43Nucleoporin 43. (380 aa)
NUP50Nucleoporin 50. (467 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (880 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
AAASAladin WD repeat nucleoporin. (546 aa)
NUP54Nucleoporin 54. (508 aa)
ENSCANP00000023391Uncharacterized protein. (356 aa)
NUP62CLNucleoporin 62 C-terminal like. (184 aa)
NUP210Nucleoporin 210. (1867 aa)
LOC105520302Histone H3; Belongs to the histone H3 family. (136 aa)
H2BU1Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105524985Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC21Histone H2B; Belongs to the histone H2B family. (126 aa)
H2AC20Histone H2A; Belongs to the histone H2A family. (129 aa)
H3F3BHistone domain-containing protein. (191 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (820 aa)
ENSCANP00000030439Uncharacterized protein. (217 aa)
SEC13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (368 aa)
NUP210LNucleoporin 210 like. (1734 aa)
LOC105505861Histone H2A; Belongs to the histone H2A family. (116 aa)
NUP205Nucleoporin 205. (2006 aa)
AGO1Argonaute RISC component 1; Belongs to the argonaute family. (857 aa)
H3F3AHistone H3; Belongs to the histone H3 family. (136 aa)
ENSCANP00000033684Histone H2A; Belongs to the histone H2A family. (107 aa)
ENSCANP00000034865Histone H2A; Belongs to the histone H2A family. (122 aa)
H2BW2H2B histone family member M; Belongs to the histone H2B family. (153 aa)
RANBP2RAN binding protein 2. (2872 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
NDC1NDC1 transmembrane nucleoporin. (674 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
POLR2FRNA polymerase II subunit F. (158 aa)
TPRTranslocated promoter region, nuclear basket protein. (2363 aa)
RANGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (233 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
POLR2GRNA polymerase II subunit G. (231 aa)
ADGRD1Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. (906 aa)
NUP188Nucleoporin 188. (1702 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
NUP42Nucleoporin 42. (423 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (641 aa)
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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