STRINGSTRING
LOC105513886 LOC105513886 MTA2 MTA2 GTF2H4 GTF2H4 POLR1C POLR1C POLR2L POLR2L UBTF UBTF TBP TBP KAT2B KAT2B POLR2F POLR2F POLR2K POLR2K H2BW2 H2BW2 ENSCANP00000035075 ENSCANP00000035075 ENSCANP00000034865 ENSCANP00000034865 ERCC2 ERCC2 ENSCANP00000033684 ENSCANP00000033684 MTA1 MTA1 ENSCANP00000033351 ENSCANP00000033351 LOC105517070 LOC105517070 H3F3A H3F3A LOC105505861 LOC105505861 TAF1A TAF1A POLR1B POLR1B ERCC6 ERCC6 TWISTNB TWISTNB HDAC1 HDAC1 H3F3B H3F3B H2AC20 H2AC20 H2BC21 H2BC21 LOC105524985 LOC105524985 H2BU1 H2BU1 GTF2H1 GTF2H1 TTF1 TTF1 TAF1C TAF1C CHD3 CHD3 LOC105520302 LOC105520302 GTF2H5 GTF2H5 CCNH CCNH POLR1E POLR1E CHD4 CHD4 HDAC2 HDAC2 GATAD2A GATAD2A TAF1D TAF1D DMTF1 DMTF1 GCNA GCNA TAF1B TAF1B C11orf88 C11orf88 ENSCANP00000022785 ENSCANP00000022785 CDK7 CDK7 TBPL1 TBPL1 MTA3 MTA3 MNAT1 MNAT1 LOC105524160 LOC105524160 LOC105512501 LOC105512501 GATAD2B GATAD2B LOC105512667 LOC105512667 MBD2 MBD2 CHD5 CHD5 POLR1A POLR1A ENSCANP00000016853 ENSCANP00000016853 MAPK3 MAPK3 ENSCANP00000014925 ENSCANP00000014925 LOC105501336 LOC105501336 LOC105516286 LOC105516286 MBD3 MBD3 LOC105501639 LOC105501639 AIRE AIRE KAT2A KAT2A UBN2 UBN2 POLR2E POLR2E CD3EAP CD3EAP POLR2H POLR2H ZNRD1 ZNRD1 ENSCANP00000006424 ENSCANP00000006424 LOC105526757 LOC105526757 LOC105526753 LOC105526753 LOC105526752 LOC105526752 LOC105526750 LOC105526750 ENSCANP00000005619 ENSCANP00000005619 LOC105513908 LOC105513908 H2BC14 H2BC14 LOC105506722 LOC105506722 ENSCANP00000004484 ENSCANP00000004484 LOC105513905 LOC105513905 LOC105513883 LOC105513883 H2AZ2 H2AZ2 ENSCANP00000004360 ENSCANP00000004360 LOC105526755 LOC105526755 RBBP4 RBBP4 LOC105513873 LOC105513873 LOC105506127 LOC105506127 LOC105519951 LOC105519951 LOC105526748 LOC105526748 LOC105526741-4 LOC105526741-4 LOC105509399 LOC105509399 RRN3 RRN3 H2BC3 H2BC3 H2BC1 H2BC1 LOC105526740 LOC105526740 LOC105526737 LOC105526737 LOC105508545 LOC105508545 LOC105526741-3 LOC105526741-3 LOC105513882 LOC105513882 LOC105513874 LOC105513874 LOC105527037 LOC105527037 LOC105526734 LOC105526734 ENSCANP00000002791 ENSCANP00000002791 ENSCANP00000002755 ENSCANP00000002755 LOC105507268 LOC105507268 H2AX H2AX CBX3 CBX3 ENSCANP00000002558 ENSCANP00000002558 LOC105510607 LOC105510607 ENSCANP00000002473 ENSCANP00000002473 LOC105526736 LOC105526736 H2AJ H2AJ LOC105526735 LOC105526735 ERCC3 ERCC3 H2BC5 H2BC5 LOC105526741-2 LOC105526741-2 LOC105520452 LOC105520452 H2AC6 H2AC6 H2AC7 H2AC7 ENSCANP00000001382 ENSCANP00000001382 RBBP7 RBBP7 ENSCANP00000001018 ENSCANP00000001018 H2BC15 H2BC15 ENSCANP00000000860 ENSCANP00000000860 ENSCANP00000000858 ENSCANP00000000858 H3C13 H3C13 LOC105526741 LOC105526741 ENSCANP00000000105 ENSCANP00000000105 EHMT2 EHMT2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC105513886Histone H3.1. (136 aa)
MTA2Metastasis associated 1 family member 2. (673 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
POLR1CRNA polymerase I and III subunit C. (350 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
UBTFUpstream binding transcription factor. (764 aa)
TBPTATA-box binding protein. (328 aa)
KAT2BHistone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (778 aa)
POLR2FRNA polymerase II subunit F. (158 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
H2BW2H2B histone family member M; Belongs to the histone H2B family. (153 aa)
ENSCANP00000035075Uncharacterized protein. (208 aa)
ENSCANP00000034865Histone H2A; Belongs to the histone H2A family. (122 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (760 aa)
ENSCANP00000033684Histone H2A; Belongs to the histone H2A family. (107 aa)
MTA1Metastasis associated 1. (712 aa)
ENSCANP00000033351Uncharacterized protein. (84 aa)
LOC105517070Uncharacterized protein. (488 aa)
H3F3AHistone H3; Belongs to the histone H3 family. (136 aa)
LOC105505861Histone H2A; Belongs to the histone H2A family. (116 aa)
TAF1ATATA-box binding protein associated factor, RNA polymerase I subunit A. (451 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1157 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1494 aa)
TWISTNBTWIST neighbor. (338 aa)
HDAC1Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (476 aa)
H3F3BHistone domain-containing protein. (191 aa)
H2AC20Histone H2A; Belongs to the histone H2A family. (129 aa)
H2BC21Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105524985Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BU1Histone H2B; Belongs to the histone H2B family. (126 aa)
GTF2H1General transcription factor IIH subunit 1. (557 aa)
TTF1Transcription termination factor 1. (775 aa)
TAF1CTATA-box binding protein associated factor, RNA polymerase I subunit C. (843 aa)
CHD3Chromodomain helicase DNA binding protein 3. (2000 aa)
LOC105520302Histone H3; Belongs to the histone H3 family. (136 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
CCNHCyclin H; Belongs to the cyclin family. (339 aa)
POLR1ERNA polymerase I subunit E. (477 aa)
CHD4Uncharacterized protein. (1882 aa)
HDAC2Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (488 aa)
GATAD2AGATA-type domain-containing protein. (648 aa)
TAF1DTATA-box binding protein associated factor, RNA polymerase I subunit D. (278 aa)
DMTF1Cyclin D binding myb like transcription factor 1. (761 aa)
GCNAGerm cell nuclear acidic peptidase. (577 aa)
TAF1BTATA-box binding protein associated factor, RNA polymerase I subunit B. (588 aa)
C11orf88Chromosome 11 open reading frame 88. (195 aa)
ENSCANP00000022785Protein kinase domain-containing protein. (322 aa)
CDK7Cyclin dependent kinase 7. (309 aa)
TBPL1TATA-box binding protein like 1. (186 aa)
MTA3Metastasis associated 1 family member 3. (591 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
LOC105524160General transcription factor IIH subunit. (395 aa)
LOC105512501WD_REPEATS_REGION domain-containing protein. (396 aa)
GATAD2BGATA zinc finger domain containing 2B. (593 aa)
LOC105512667Histone H2A; Belongs to the histone H2A family. (130 aa)
MBD2Methyl-CpG binding domain protein 2. (230 aa)
CHD5Chromodomain helicase DNA binding protein 5. (1989 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1699 aa)
ENSCANP00000016853P66_CC domain-containing protein. (184 aa)
MAPK3Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (380 aa)
ENSCANP00000014925Histone H2B; Belongs to the histone H2B family. (121 aa)
LOC105501336Uncharacterized protein. (153 aa)
LOC105516286Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (449 aa)
MBD3Methyl-CpG binding domain protein 3. (259 aa)
LOC105501639WD_REPEATS_REGION domain-containing protein. (398 aa)
AIREAutoimmune regulator. (509 aa)
KAT2AHistone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (837 aa)
UBN2Ubinuclein 2. (1255 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
CD3EAPCD3e molecule associated protein. (513 aa)
POLR2HRNA polymerase II subunit H. (175 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
ENSCANP00000006424annotation not available (103 aa)
LOC105526757Histone H4. (103 aa)
LOC105526753Histone H2A type 1. (130 aa)
LOC105526752Histone H4. (103 aa)
LOC105526750Histone H3.1. (136 aa)
ENSCANP00000005619annotation not available (136 aa)
LOC105513908Histone H2B type 1-J. (126 aa)
H2BC14Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105506722Histone H3; Belongs to the histone H3 family. (136 aa)
ENSCANP00000004484annotation not available (136 aa)
LOC105513905Histone H4. (103 aa)
LOC105513883Histone H4. (103 aa)
H2AZ2Histone H2A; Belongs to the histone H2A family. (102 aa)
ENSCANP00000004360annotation not available (136 aa)
LOC105526755Histone H3.1. (136 aa)
RBBP4RB binding protein 4, chromatin remodeling factor. (425 aa)
LOC105513873Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105506127Histone H3; Belongs to the histone H3 family. (136 aa)
LOC105519951Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105526748Histone H4. (103 aa)
LOC105526741-4Histone H2B type 1. (126 aa)
LOC105509399Histone H3; Belongs to the histone H3 family. (135 aa)
RRN3RRN3 homolog, RNA polymerase I transcription factor. (512 aa)
H2BC3Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC1Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC105526740Histone H4. (103 aa)
LOC105526737Histone H4. (103 aa)
LOC105508545Uncharacterized protein. (162 aa)
LOC105526741-3Histone H2B type 1. (126 aa)
LOC105513882Histone H4. (103 aa)
LOC105513874Histone H4. (103 aa)
LOC105527037Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (459 aa)
LOC105526734Histone H2A; Belongs to the histone H2A family. (130 aa)
ENSCANP00000002791Histone H2B; Belongs to the histone H2B family. (129 aa)
ENSCANP00000002755WD_REPEATS_REGION domain-containing protein. (343 aa)
LOC105507268Histone H3; Belongs to the histone H3 family. (136 aa)
H2AXHistone H2A; Belongs to the histone H2A family. (143 aa)
CBX3Chromobox 3. (183 aa)
ENSCANP00000002558annotation not available (136 aa)
LOC105510607Histone H3; Belongs to the histone H3 family. (136 aa)
ENSCANP00000002473Histone H2B; Belongs to the histone H2B family. (134 aa)
LOC105526736Histone H4. (103 aa)
H2AJHistone H2A; Belongs to the histone H2A family. (129 aa)
LOC105526735Histone H3.1. (136 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
H2BC5Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105526741-2Histone H2B type 1. (126 aa)
LOC105520452Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
H2AC6Histone H2A; Belongs to the histone H2A family. (130 aa)
H2AC7Histone H2A; Belongs to the histone H2A family. (130 aa)
ENSCANP00000001382Histone H3; Belongs to the histone H3 family. (136 aa)
RBBP7RB binding protein 7, chromatin remodeling factor. (466 aa)
ENSCANP00000001018annotation not available (136 aa)
H2BC15Histone H2B; Belongs to the histone H2B family. (166 aa)
ENSCANP00000000860annotation not available (136 aa)
ENSCANP00000000858Histone H2B; Belongs to the histone H2B family. (136 aa)
H3C13Histone H3; Belongs to the histone H3 family. (136 aa)
LOC105526741Histone H2B; Belongs to the histone H2B family. (126 aa)
ENSCANP00000000105Histone H3; Belongs to the histone H3 family. (136 aa)
EHMT2Euchromatic histone lysine methyltransferase 2. (1266 aa)
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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