45 items (Colobus angolensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APOA1	Apolipoprotein A1. (267 aa)
	LOC105525710	Uncharacterized protein. (3238 aa)
	RBP2	Retinol binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (134 aa)
	BCO1	Beta-carotene oxygenase 1. (547 aa)
	GPC4	Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (502 aa)
	LRP2	LDL receptor related protein 2. (4655 aa)
	SDC4	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (198 aa)
	LOC105521699	Aldo_ket_red domain-containing protein. (323 aa)
	GPC6	Glypican 6; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (555 aa)
	LRP10	LDL receptor related protein 10. (716 aa)
	TTR	Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. (163 aa)
	RBP4	Retinol-binding protein; Retinol-binding protein that mediates retinol transport in blood plasma. (226 aa)
	APOM	Apolipoprotein M. (188 aa)
	GPC3	Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (603 aa)
	GPC5	Glypican 5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (572 aa)
	LRP1B	LDL receptor related protein 1B. (4558 aa)
	PLB1	Phospholipase B1. (1462 aa)
	RDH11	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (318 aa)
	AKR1C3	Aldo-keto reductase family 1 member C3. (323 aa)
	APOE	Apolipoprotein E. (189 aa)
	LRP12	LDL receptor related protein 12. (859 aa)
	AGRN	Agrin. (1697 aa)
	HSPG2	Heparan sulfate proteoglycan 2. (4290 aa)
	GPC1	Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (508 aa)
	LPL	Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans. (475 aa)
	CLPS	Colipase. (112 aa)
	APOA2	Apolipoprotein A2. (100 aa)
	RETSAT	Retinol saturase. (610 aa)
	GPIHBP1	Glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1. (141 aa)
	SDC3	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (396 aa)
	LDLR	Low density lipoprotein receptor. (777 aa)
	SDC1	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (288 aa)
	LRP8	LDL receptor related protein 8. (880 aa)
	APOC3	Apolipoprotein C3. (117 aa)
	APOA4	Apolipoprotein A4. (412 aa)
	RBP1	Retinol binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (197 aa)
	LOC105521705	Aldo_ket_red domain-containing protein. (293 aa)
	LRAT	Lecithin retinol acyltransferase. (230 aa)
	APOC2	Apolipoprotein C2. (101 aa)
	APOB	Apolipoprotein B. (4555 aa)
	LRP3	LDL receptor related protein 3. (771 aa)
	GPC2	Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (503 aa)
	LRP1	LDL receptor related protein 1. (4544 aa)
	SDC2	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (201 aa)
	BCO2	Beta-carotene oxygenase 2. (579 aa)

Your Current Organism:

Colobus angolensis

NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGRN	APOB	ENSCANP00000018554	ENSCANP00000000289	Agrin.	Apolipoprotein B.	0.517
AGRN	APOE	ENSCANP00000018554	ENSCANP00000019437	Agrin.	Apolipoprotein E.	0.609
AGRN	GPC1	ENSCANP00000018554	ENSCANP00000017281	Agrin.	Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.477
AGRN	GPC3	ENSCANP00000018554	ENSCANP00000023500	Agrin.	Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.421
AGRN	GPC6	ENSCANP00000018554	ENSCANP00000031952	Agrin.	Glypican 6; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.411
AGRN	HSPG2	ENSCANP00000018554	ENSCANP00000017360	Agrin.	Heparan sulfate proteoglycan 2.	0.686
AGRN	LDLR	ENSCANP00000018554	ENSCANP00000008346	Agrin.	Low density lipoprotein receptor.	0.626
AGRN	LOC105525710	ENSCANP00000018554	ENSCANP00000035076	Agrin.	Uncharacterized protein.	0.425
AGRN	LRP1	ENSCANP00000018554	ENSCANP00000039812	Agrin.	LDL receptor related protein 1.	0.781
AGRN	LRP10	ENSCANP00000018554	ENSCANP00000031885	Agrin.	LDL receptor related protein 10.	0.457
AGRN	LRP12	ENSCANP00000018554	ENSCANP00000018705	Agrin.	LDL receptor related protein 12.	0.457
AGRN	LRP1B	ENSCANP00000018554	ENSCANP00000021886	Agrin.	LDL receptor related protein 1B.	0.781
AGRN	LRP2	ENSCANP00000018554	ENSCANP00000033887	Agrin.	LDL receptor related protein 2.	0.923
AGRN	LRP3	ENSCANP00000018554	ENSCANP00000000657	Agrin.	LDL receptor related protein 3.	0.457
AGRN	LRP8	ENSCANP00000018554	ENSCANP00000006932	Agrin.	LDL receptor related protein 8.	0.694
AGRN	SDC1	ENSCANP00000018554	ENSCANP00000007707	Agrin.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.614
AGRN	SDC3	ENSCANP00000018554	ENSCANP00000009482	Agrin.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.484
AKR1C3	LOC105521699	ENSCANP00000019714	ENSCANP00000032377	Aldo-keto reductase family 1 member C3.	Aldo_ket_red domain-containing protein.	0.786
APOA1	APOA2	ENSCANP00000040304	ENSCANP00000010601	Apolipoprotein A1.	Apolipoprotein A2.	0.761
APOA1	APOA4	ENSCANP00000040304	ENSCANP00000005394	Apolipoprotein A1.	Apolipoprotein A4.	0.834