Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KTR02921.1 | KTR04000.1 | NS184_14800 | NS184_12750 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.466 |
| KTR04000.1 | KTR02921.1 | NS184_12750 | NS184_14800 | Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.466 |
| KTR04000.1 | KTR05643.1 | NS184_12750 | NS184_10165 | Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. | 0.650 |
| KTR04000.1 | KTR07404.1 | NS184_12750 | NS184_07735 | Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.988 |
| KTR04000.1 | KTR08082.1 | NS184_12750 | NS184_06590 | Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.765 |
| KTR05643.1 | KTR04000.1 | NS184_10165 | NS184_12750 | Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. | Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.650 |
| KTR05643.1 | KTR08082.1 | NS184_10165 | NS184_06590 | Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. | Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.987 |
| KTR07128.1 | KTR08082.1 | NS184_08190 | NS184_06590 | Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
| KTR07128.1 | KTR09791.1 | NS184_08190 | NS184_02235 | Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.991 |
| KTR07404.1 | KTR04000.1 | NS184_07735 | NS184_12750 | Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.988 |
| KTR07404.1 | KTR07408.1 | NS184_07735 | NS184_07760 | Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.600 |
| KTR07404.1 | KTR08082.1 | NS184_07735 | NS184_06590 | Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| KTR07404.1 | KTR09791.1 | NS184_07735 | NS184_02235 | Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.649 |
| KTR07408.1 | KTR07404.1 | NS184_07760 | NS184_07735 | 3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.600 |
| KTR07408.1 | KTR08082.1 | NS184_07760 | NS184_06590 | 3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.525 |
| KTR08082.1 | KTR04000.1 | NS184_06590 | NS184_12750 | Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.765 |
| KTR08082.1 | KTR05643.1 | NS184_06590 | NS184_10165 | Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. | 0.987 |
| KTR08082.1 | KTR07128.1 | NS184_06590 | NS184_08190 | Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
| KTR08082.1 | KTR07404.1 | NS184_06590 | NS184_07735 | Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| KTR08082.1 | KTR07408.1 | NS184_06590 | NS184_07760 | Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.525 |
page 1 of 2