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| | recF | DNA replication/repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (392 aa) |
| | gyrB | DNA topoisomerase IV subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (689 aa) |
| | gyrA | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (866 aa) |
| | A6122_0021 | Serine/threonine protein kinase. (567 aa) |
| | A6122_0064 | Transposase. (96 aa) |
| | A6122_0070 | Aldo/keto reductase. (340 aa) |
| | A6122_0082 | Hypothetical protein. (144 aa) |
| | A6122_0155 | Hypothetical protein. (215 aa) |
| | A6122_0156 | IMP dehydrogenase. (349 aa) |
| | A6122_0158 | Acetyl-coenzyme A synthetase. (672 aa) |
| | A6122_0187 | Hypothetical protein. (291 aa) |
| | A6122_0188 | Hypothetical protein. (453 aa) |
| | A6122_0193 | Hypothetical protein. (53 aa) |
| | A6122_0194 | Hypothetical protein. (168 aa) |
| | A6122_0216 | Peptide ABC transporter ATP-binding protein. (250 aa) |
| | A6122_0250 | ABC transporter ATP-binding protein. (229 aa) |
| | A6122_0276 | Pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha. (375 aa) |
| | A6122_0277 | Pyruvate dehydrogenase. (342 aa) |
| | A6122_0291 | Dehydrogenase. (485 aa) |
| | A6122_0303 | Hypothetical protein. (169 aa) |
| | A6122_0304 | Ribonuclease BN. (510 aa) |
| | rpmB | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (78 aa) |
| | rpmG | 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (55 aa) |
| | rpsN | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | deoC | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (241 aa) |
| | A6122_0321 | Transposase. (96 aa) |
| | A6122_0341 | ATPase. (165 aa) |
| | A6122_0349 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. (234 aa) |
| | A6122_0362 | Hypothetical protein; Belongs to the bacterial histone-like protein family. (95 aa) |
| | A6122_0365 | Heme oxygenase. (215 aa) |
| | A6122_0376 | Phytoene dehydrogenase. (848 aa) |
| | A6122_0378 | Lycopene cyclase. (102 aa) |
| | A6122_0383 | Hypothetical protein. (196 aa) |
| | hemA | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (457 aa) |
| | A6122_0398 | Hypothetical protein. (495 aa) |
| | A6122_0399 | Hypothetical protein. (122 aa) |
| | hemH | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (404 aa) |
| | A6122_0410 | Hypothetical protein. (125 aa) |
| | A6122_0413 | Phosphonomutase. (257 aa) |
| | A6122_0418 | Hypothetical protein. (308 aa) |
| | A6122_0419 | 3-methyladenine DNA glycosylase. (312 aa) |
| | A6122_0422 | Hypothetical protein. (163 aa) |
| | A6122_0427 | Multidrug MFS transporter. (589 aa) |
| | A6122_0433 | Transposase. (96 aa) |
| | A6122_0459 | Hypothetical protein. (427 aa) |
| | A6122_0465 | AAA family ATPase. (511 aa) |
| | A6122_0499 | Hypothetical protein. (683 aa) |
| | A6122_0502 | Hypothetical protein. (458 aa) |
| | A6122_0533 | Prephenate dehydratase. (323 aa) |
| | A6122_0534 | Hypothetical protein. (365 aa) |
| | rpsL | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (124 aa) |
| | rpsG | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | A6122_0574 | DNA topoisomerase. (327 aa) |
| | rpsJ | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa) |
| | rplC | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (222 aa) |
| | rplD | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (225 aa) |
| | rplW | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (102 aa) |
| | rplB | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (279 aa) |
| | rpsS | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (93 aa) |
| | rplV | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (121 aa) |
| | rpsC | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (252 aa) |
| | rplP | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (139 aa) |
| | rpmC | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (108 aa) |
| | rpsQ | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (104 aa) |
| | rplN | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rplX | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (119 aa) |
| | rplE | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (194 aa) |
| | rpsH | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa) |
| | rplF | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (178 aa) |
| | rplR | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (125 aa) |
| | rpsE | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (234 aa) |
| | rpmD | 50S ribosomal protein L30. (60 aa) |
| | rplO | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (174 aa) |
| | rpmJ | 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (38 aa) |
| | rpsM | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (126 aa) |
| | rpsK | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (132 aa) |
| | rplQ | 50S ribosomal protein L17. (180 aa) |
| | truA | tRNA pseudouridine(38-40) synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (297 aa) |
| | rplM | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (148 aa) |
| | rpsI | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (161 aa) |
| | A6122_0639 | Pyruvate carboxyltransferase. (373 aa) |
| | A6122_0651 | Transposase; Required for the transposition of the insertion element. (398 aa) |
| | A6122_0652 | Transposase; Required for the transposition of the insertion element. (445 aa) |
| | A6122_0653 | Transposase. (87 aa) |
| | A6122_0657 | Hypothetical protein. (267 aa) |
| | A6122_0675 | Transposase. (456 aa) |
| | A6122_0681 | Transposase. (96 aa) |
| | A6122_0686 | Hypothetical protein. (424 aa) |
| | A6122_0726 | Fatty acid-binding protein; May play a role in the intracellular transport of hydrophobic ligands. (202 aa) |
| | A6122_0739 | Lipopolysaccharide kinase. (438 aa) |
| | A6122_0754 | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (372 aa) |
| | A6122_0758 | HNH endonuclease. (165 aa) |
| | A6122_0779 | Polyketide biosynthesis 3-hydroxy-3-methylglutaryl-ACP synthase PksG. (418 aa) |
| | A6122_0785 | Transposase. (456 aa) |
| | A6122_0795 | O-acetylhomoserine aminocarboxypropyltransferase. (464 aa) |
| | ispE | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (311 aa) |
| | A6122_0810 | Glutathione S-transferase. (338 aa) |
| | rplY | 50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (202 aa) |
| | A6122_0836 | Short-chain dehydrogenase. (282 aa) |
| | A6122_0840 | enoyl-CoA hydratase. (263 aa) |
| | A6122_0841 | Arginase; Belongs to the arginase family. (277 aa) |
| | A6122_0854 | Macrolide 2'-phosphotransferase. (355 aa) |
| | A6122_0855 | NADH pyrophosphatase. (314 aa) |
| | A6122_0874 | Fe-S cluster assembly protein HesB. (211 aa) |
| | A6122_0900 | Aldo/keto reductase. (327 aa) |
| | A6122_0902 | Glucoamylase. (590 aa) |
| | A6122_0920 | Hypothetical protein. (335 aa) |
| | A6122_0932 | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase. (261 aa) |
| | A6122_0934 | Hypothetical protein. (544 aa) |
| | rpsO | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa) |
| | A6122_0987 | Nucleoside-diphosphate sugar epimerase. (342 aa) |
| | A6122_0989 | Hypothetical protein. (150 aa) |
| | A6122_1007 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (773 aa) |
| | rpmI | 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (64 aa) |
| | rplT | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (128 aa) |
| | argC | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (349 aa) |
| | argB | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (317 aa) |
| | A6122_1033 | Hypothetical protein. (209 aa) |
| | A6122_1038 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (562 aa) |
| | A6122_1042 | Chromosome partitioning protein. (327 aa) |
| | A6122_1053 | Hypothetical protein. (1115 aa) |
| | A6122_1069 | ATP-dependent DNA ligase. (380 aa) |
| | nnrE | Hypothetical protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. (243 aa) |
| | A6122_1083 | DNA glycosylase. (201 aa) |
| | A6122_1092 | Thioredoxin; Belongs to the thioredoxin family. (118 aa) |
| | A6122_1099 | Chromosome partitioning protein ParA. (269 aa) |
| | A6122_1103 | long-chain-fatty-acid--CoA ligase. (607 aa) |
| | A6122_1105 | Hypothetical protein. (229 aa) |
| | pknB | Serine/threonine protein kinase. (652 aa) |
| | pdxS | Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (305 aa) |
| | A6122_1162 | Hypothetical protein. (445 aa) |
| | A6122_1173 | ATPase. (407 aa) |
| | A6122_1175 | AAA family ATPase. (482 aa) |
| | rpsD | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (209 aa) |
| | A6122_1180 | Crossover junction endodeoxyribonuclease RuvA; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (194 aa) |
| | A6122_1185 | Hypothetical protein. (184 aa) |
| | priA | Preprotein translocase subunit SecA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (654 aa) |
| | A6122_1216 | Glutamate synthase. (1530 aa) |
| | A6122_1221 | Hypothetical protein. (1005 aa) |
| | A6122_1234 | 30S ribosomal protein S1. (484 aa) |
| | A6122_1254 | Hypothetical protein. (319 aa) |
| | sufB | Fe-S cluster assembly protein SufB. (472 aa) |
| | A6122_1256 | Fe-S cluster assembly protein SufD. (425 aa) |
| | sufC | Fe-S cluster assembly ATPase SufC. (253 aa) |
| | A6122_1262 | Sortase. (294 aa) |
| | rpmE2 | 50S ribosomal protein L31. (82 aa) |
| | A6122_1271 | Bacteriocin-protection protein, YdeI/OmpD-associated family. (190 aa) |
| | A6122_1277 | NAD-dependent deacetylase. (289 aa) |
| | A6122_1307 | RNA helicase. (812 aa) |
| | A6122_1317 | ABC transporter substrate-binding protein. (440 aa) |
| | A6122_1335 | ABC transporter substrate-binding protein. (175 aa) |
| | A6122_1356 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (404 aa) |
| | nadD | Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (203 aa) |
| | obg | GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (511 aa) |
| | rplU | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (102 aa) |
| | A6122_1400 | Hypothetical protein. (205 aa) |
| | A6122_1403 | Dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family. (457 aa) |
| | A6122_1414 | Hypothetical protein. (180 aa) |
| | prpB | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. (303 aa) |
| | A6122_1441 | Hypothetical protein. (195 aa) |
| | A6122_1461 | Cysteine desulfurase. (407 aa) |
| | rpsB | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (328 aa) |
| | xerC | Recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (312 aa) |
| | rplS | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (115 aa) |
| | rpsP | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (136 aa) |
| | smc | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1167 aa) |
| | pucL | Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. (306 aa) |
| | uraD | Hypothetical protein. (169 aa) |
| | A6122_1528 | Hypothetical protein. (449 aa) |
| | rpmF | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (67 aa) |
| | A6122_1539 | Hypothetical protein. (297 aa) |
| | A6122_1558 | Hypothetical protein. (198 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (619 aa) |
| | A6122_1578 | Class V aminotransferase. (355 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (240 aa) |
| | leuA | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. (600 aa) |
| | ybeY | rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (153 aa) |
| | A6122_1597 | Hypothetical protein. (241 aa) |
| | rpsT | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (86 aa) |
| | A6122_1621 | Hypothetical protein. (250 aa) |
| | A6122_1632 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. (234 aa) |
| | A6122_1633 | ACP synthase. (351 aa) |
| | A6122_1651 | Putative transposase; Required for the transposition of the insertion element. (95 aa) |
| | A6122_1652 | Transposase. (456 aa) |
| | A6122_1653 | Transposase; Required for the transposition of the insertion element. (375 aa) |
| | A6122_1660 | MBL fold metallo-hydrolase. (212 aa) |
| | sbcD | Hypothetical protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (382 aa) |
| | A6122_1678 | Helicase. (718 aa) |
| | A6122_1685 | Riboflavin biosynthesis protein RibF; Belongs to the ribF family. (321 aa) |
| | A6122_1690 | Hypothetical protein. (199 aa) |
| | A6122_1703 | Acyl-phosphate glycerol 3-phosphate acyltransferase. (262 aa) |
| | A6122_1716 | Cysteine methyltransferase. (164 aa) |
| | A6122_1748 | Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (393 aa) |
| | lysA | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (477 aa) |
| | A6122_1764 | Hypothetical protein. (193 aa) |
| | A6122_1765 | Magnesium transporter. (447 aa) |
| | A6122_1796 | Cysteine desulfurase. (368 aa) |
| | A6122_1805 | Hypothetical protein; Required for the transposition of the insertion element. (78 aa) |
| | ychF | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (365 aa) |
| | A6122_1828 | acyl-CoA dehydrogenase. (388 aa) |
| | A6122_1830 | Hypothetical protein. (381 aa) |
| | A6122_1857 | Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (253 aa) |
| | A6122_1859 | Bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase. (442 aa) |
| | A6122_1870 | Hypothetical protein. (165 aa) |
| | A6122_1886 | Transposase. (460 aa) |
| | A6122_1891 | Alcohol dehydrogenase. (325 aa) |
| | hpf | RNA polymerase subunit sigma-54; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (227 aa) |
| | A6122_1916 | acyl-CoA dehydrogenase. (395 aa) |
| | A6122_1939 | Hypothetical protein. (686 aa) |
| | A6122_1956 | Phosphomannomutase. (555 aa) |
| | pckG | Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. (628 aa) |
| | rnhA | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (173 aa) |
| | A6122_2000 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa) |
| | A6122_2002 | Hypothetical protein. (239 aa) |
| | A6122_2010 | Hypothetical protein. (430 aa) |
| | A6122_2050 | Transposase. (96 aa) |
| | A6122_2055 | Transposase. (96 aa) |
| | A6122_2092 | Transposase. (96 aa) |
| | A6122_2099 | Transposase; Required for the transposition of the insertion element. (448 aa) |
| | A6122_2104 | Hypothetical protein. (561 aa) |
| | A6122_2107 | Transposase. (456 aa) |
| | A6122_2115 | DEAD/DEAH box helicase. (841 aa) |
| | topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (969 aa) |
| | A6122_2145 | Hypothetical protein. (332 aa) |
| | A6122_2146 | Hypothetical protein. (338 aa) |
| | acs | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (664 aa) |
| | A6122_2151 | Metallophosphatase. (337 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (199 aa) |
| | fdhA | Formaldehyde dehydrogenase, glutathione-independent. (404 aa) |
| | A6122_2182 | Transposase. (96 aa) |
| | A6122_2185 | Transposase. (96 aa) |
| | A6122_2217 | Transposase. (96 aa) |
| | A6122_2246 | Hypothetical protein. (148 aa) |
| | A6122_2249 | AAA family ATPase; Belongs to the ClpA/ClpB family. (842 aa) |
| | A6122_2273 | Sugar ABC transporter substrate-binding protein. (447 aa) |
| | rplL | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (127 aa) |
| | rplJ | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (171 aa) |
| | A6122_2284 | Hypothetical protein. (77 aa) |
| | rplA | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (230 aa) |
| | rplK | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (142 aa) |
| | A6122_2350 | Isochorismate synthase. (413 aa) |
| | A6122_2351 | Hypothetical protein. (431 aa) |
| | A6122_2360 | Glycoside hydrolase. (604 aa) |
| | A6122_2364 | C-type cytochrome biogenesis protein CcsB. (347 aa) |
| | A6122_2366 | Cytochrome c biogenesis protein. (246 aa) |
| | A6122_2372 | Transposase. (456 aa) |
| | A6122_2379 | Cation diffusion facilitator family transporter. (336 aa) |
| | A6122_2391 | Hypothetical protein. (1140 aa) |
| | A6122_2409 | Hypothetical protein. (253 aa) |
| | A6122_2419 | Monooxygenase. (411 aa) |
| | A6122_2442 | N-acetylglutamate synthase; Belongs to the acetyltransferase family. (169 aa) |
| | A6122_2443 | NDP-hexose 4-ketoreductase; Belongs to the ClpA/ClpB family. (836 aa) |
| | A6122_2446 | Pirin; Belongs to the pirin family. (329 aa) |
| | A6122_2451 | Hypothetical protein. (332 aa) |
| | A6122_2471 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase. (198 aa) |
| | A6122_2500 | acyl-CoA dehydrogenase. (714 aa) |
| | A6122_2501 | ATP-dependent DNA helicase RecQ. (711 aa) |
| | A6122_2507 | Phosphatidylinositol kinase. (254 aa) |
| | A6122_2509 | Magnesium chelatase. (513 aa) |
| | A6122_2523 | L-ribulose-5-phosphate 4-epimerase. (236 aa) |
| | A6122_2527 | Photosystem reaction center subunit H. (273 aa) |
| | A6122_2529 | Hypothetical protein. (150 aa) |
| | A6122_2535 | ABC transporter. (568 aa) |
| | A6122_2556 | Hypothetical protein. (536 aa) |
| | A6122_2558 | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (398 aa) |
| | A6122_2574 | N-dimethylarginine dimethylaminohydrolase. (278 aa) |
| | A6122_2590 | Hypothetical protein. (485 aa) |
| | A6122_2599 | Acetyltransferase. (178 aa) |
| | purF | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (485 aa) |
| | A6122_2604 | Hypothetical protein. (125 aa) |
| | purD | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. (422 aa) |
| | A6122_2606 | NAD-dependent epimerase. (321 aa) |
| | A6122_2617 | Cytochrome C biogenesis protein CcdA. (266 aa) |
| | A6122_2620 | Transposase. (96 aa) |
| | A6122_2657 | Aldo/keto reductase. (285 aa) |
| | A6122_2679 | Transposase. (96 aa) |
| | A6122_2685 | Transposase. (96 aa) |
| | A6122_2688 | Transposase. (460 aa) |
| | A6122_2717 | L-idonate 5-dehydrogenase. (346 aa) |
| | A6122_2719 | Fumarylacetoacetate hydrolase. (255 aa) |
| | A6122_2754 | hydroxymethylglutaryl-CoA lyase. (308 aa) |
| | A6122_2755 | CoA-transferase; Belongs to the CoA-transferase III family. (427 aa) |
| | A6122_2794 | NADP oxidoreductase. (213 aa) |
| | A6122_2804 | Hypothetical protein. (175 aa) |
| | A6122_2816 | Cation transporter. (312 aa) |
| | A6122_2830 | Sugar ABC transporter substrate-binding protein. (428 aa) |
| | A6122_2850 | AMP-dependent synthetase. (559 aa) |
| | A6122_2859 | Sugar ABC transporter substrate-binding protein. (430 aa) |
| | A6122_2862 | ATPase. (393 aa) |
| | A6122_2869 | Hypothetical protein. (155 aa) |
| | A6122_2896 | ABC transporter ATP-binding protein. (233 aa) |
| | A6122_2900 | ABC transporter ATP-binding protein. (239 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (457 aa) |
| | rpsR | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (86 aa) |
| | rpsF | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (125 aa) |
| | A6122_2917 | Hypothetical protein. (736 aa) |
| | A6122_2923 | Chromosome partitioning protein ParB; Belongs to the ParB family. (322 aa) |
| | A6122_2924 | Chromosome partitioning protein. (289 aa) |
| | rpmH | 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (45 aa) |
