STRINGSTRING
OlmA6 OlmA6 OlmA2 OlmA2 KUN57231.1 KUN57231.1 Nrps1-1 Nrps1-1 Nrps2-1 Nrps2-1 KUN56797.1 KUN56797.1 Nrps2-3 Nrps2-3 Pks2-2 Pks2-2 Pks1-3 Pks1-3 Nrps7-9 Nrps7-9 Nrps7-10 Nrps7-10 KUN51283.1 KUN51283.1 Nrps7-12 Nrps7-12 PteA2 PteA2 Pks3-3 Pks3-3 Pks3-2 Pks3-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OlmA6Carrier domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (4685 aa)
OlmA2Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (4843 aa)
KUN57231.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1758 aa)
Nrps1-1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1768 aa)
Nrps2-1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (3691 aa)
KUN56797.1Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
Nrps2-3Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
Pks2-2Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (4809 aa)
Pks1-3Erythronolide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2355 aa)
Nrps7-9Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
Nrps7-10Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
KUN51283.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (82 aa)
Nrps7-12Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (916 aa)
PteA2Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3564 aa)
Pks3-3Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)
Pks3-2Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1875 aa)
Your Current Organism:
Streptomyces avermitilis
NCBI taxonomy Id: 33903
Other names: ATCC 31267, DSM 46492, JCM 5070, NBRC 14893, NCIMB 12804, NRRL 8165, S. avermitilis, Streptomyces avermectinius, Streptomyces avermectinius Takahashi et al. 2002, strain MA-4680
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