74 items (Streptomyces avermitilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KUN54286.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
	KUN50899.1	Copper amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
	FecB	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
	KUN50562.1	Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
	KUN50407.1	Polyisoprenoid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family. (225 aa)
	OppA8	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa)
	OppA7	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa)
	PotD2	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
	KUN49773.1	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	AQJ43_35865	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)
	KUN49719.1	Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
	XylF	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
	KUN51212.1	Ketosteroid isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
	KUN51189.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	KUN51488.1	Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
	TbpA	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
	KUN51395.1	Polyisoprenoid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family. (206 aa)
	KUN51350.1	Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
	OppA1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (590 aa)
	KUN51672.1	3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)
	KUN51510.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
	KUN51878.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)
	SidF	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
	KUN52115.1	Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (335 aa)
	KUN52090.1	Cell shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
	KUN52313.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
	KUN52558.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
	SsuA5	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
	KUN52499.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)
	KUN52776.1	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa)
	KUN52692.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family. (273 aa)
	CopC	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (694 aa)
	OppA11	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)
	KUN53047.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
	KUN53361.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (975 aa)
	KUN53901.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
	KUN53853.1	Molybdopterin-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (743 aa)
	PacB3	Penicillin acylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (894 aa)
	KUN53823.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
	OppA9	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (534 aa)
	OppA10	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)
	KUN53731.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
	ChvE	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
	KUN54565.1	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	KUN54474.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
	KUN54467.1	TolB-like translocation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
	KUN54362.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
	KUN54358.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
	LivK2	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
	LivK3	Branched chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
	KUN54136.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
	KUN54041.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
	PotD3	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
	KUN55366.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
	KUN55365.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family. (171 aa)
	AmiC	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
	LivK1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
	KUN55267.1	Molybdopterin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
	XynB1	Xylan 1,4-beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)
	AgaB2	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (652 aa)
	KUN55512.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
	ModA	Molybdate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
	PotD1	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
	KUN55855.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (691 aa)
	KUN55716.1	5-hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. (135 aa)
	KUN55701.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (96 aa)
	KUN55700.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (82 aa)
	KUN56980.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
	BsaA	Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutathione peroxidase family. (169 aa)
	KUN56521.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
	BldKB2	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (602 aa)
	BldKB1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (587 aa)
	OppA4	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)
	OppA3	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa)

Your Current Organism:

Streptomyces avermitilis

NCBI taxonomy Id: 33903
Other names: ATCC 31267, DSM 46492, JCM 5070, NBRC 14893, NCIMB 12804, NRRL 8165, S. avermitilis, Streptomyces avermectinius, Streptomyces avermectinius Takahashi et al. 2002, strain MA-4680

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQJ43_35865	KUN49719.1	AQJ43_35865	AQJ43_35870	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.494
AgaB2	XynB1	AQJ43_09170	AQJ43_09280	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xylan 1,4-beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.469
AmiC	LivK1	AQJ43_10580	AQJ43_10575	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
BldKB1	BldKB2	AQJ43_01765	AQJ43_01880	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425
BldKB1	OppA1	AQJ43_01765	AQJ43_27570	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.516
BldKB1	OppA10	AQJ43_01765	AQJ43_16850	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.496
BldKB1	OppA11	AQJ43_01765	AQJ43_19715	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.527
BldKB1	OppA3	AQJ43_01765	AQJ43_01475	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.507
BldKB1	OppA4	AQJ43_01765	AQJ43_01755	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
BldKB1	OppA7	AQJ43_01765	AQJ43_33485	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436
BldKB1	OppA9	AQJ43_01765	AQJ43_16855	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
BldKB2	BldKB1	AQJ43_01880	AQJ43_01765	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425
BldKB2	OppA1	AQJ43_01880	AQJ43_27570	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.504
BldKB2	OppA10	AQJ43_01880	AQJ43_16850	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
BldKB2	OppA11	AQJ43_01880	AQJ43_19715	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.473
BldKB2	OppA3	AQJ43_01880	AQJ43_01475	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.486
BldKB2	OppA4	AQJ43_01880	AQJ43_01755	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.552
BldKB2	OppA7	AQJ43_01880	AQJ43_33485	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.506
BldKB2	OppA9	AQJ43_01880	AQJ43_16855	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.476
CopC	KUN51189.1	AQJ43_20900	AQJ43_28510	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.419

page 1 of 7

Server load: low (28%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About