STRINGSTRING
rsbV_4 rsbV_4 KUN57354.1 KUN57354.1 arsI arsI KUN56975.1 KUN56975.1 KUN57049.1 KUN57049.1 KUN55982.1 KUN55982.1 KUN54781.1 KUN54781.1 RsbS RsbS RsbR RsbR KUN54791.1 KUN54791.1 KUN53076.1 KUN53076.1 KUN52485.1 KUN52485.1 rsbV_2 rsbV_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rsbV_4Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (122 aa)
KUN57354.1Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (107 aa)
arsIMetal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (122 aa)
KUN56975.1Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (126 aa)
KUN57049.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (107 aa)
KUN55982.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
KUN54781.1Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
RsbSAnti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
RsbRHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
KUN54791.1Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (129 aa)
KUN53076.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)
KUN52485.1Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (125 aa)
rsbV_2Anti-sigma B factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (113 aa)
Your Current Organism:
Streptomyces avermitilis
NCBI taxonomy Id: 33903
Other names: ATCC 31267, DSM 46492, JCM 5070, NBRC 14893, NCIMB 12804, NRRL 8165, S. avermitilis, Streptomyces avermectinius, Streptomyces avermectinius Takahashi et al. 2002, strain MA-4680
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