STRINGSTRING
AspB2 AspB2 KUN56372.1 KUN56372.1 AspB3 AspB3 KUN56609.1 KUN56609.1 AspB1 AspB1 KUN55850.1 KUN55850.1 kbl kbl KUN54886.1 KUN54886.1 CobC CobC KUN54217.1 KUN54217.1 hisC hisC KUN54655.1 KUN54655.1 KUN53498.1 KUN53498.1 KUN53538.1 KUN53538.1 KUN53703.1 KUN53703.1 BioF BioF KUN53247.1 KUN53247.1 KUN53209.1 KUN53209.1 pat pat KUN52970.1 KUN52970.1 AspC1 AspC1 DapC DapC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AspB2Succinyldiaminopimelate transaminase; Catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
KUN56372.1Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
AspB3Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
KUN56609.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
AspB1Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
KUN55850.1Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
kbl2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. (397 aa)
KUN54886.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)
CobCAminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
KUN54217.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
hisCAspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (369 aa)
KUN54655.1Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa)
KUN53498.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
KUN53538.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)
KUN53703.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
BioF8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
KUN53247.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)
KUN53209.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
patAminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (359 aa)
KUN52970.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)
AspC1Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
DapCAminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
Your Current Organism:
Streptomyces avermitilis
NCBI taxonomy Id: 33903
Other names: ATCC 31267, DSM 46492, JCM 5070, NBRC 14893, NCIMB 12804, NRRL 8165, S. avermitilis, Streptomyces avermectinius, Streptomyces avermectinius Takahashi et al. 2002, strain MA-4680
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