(10 nodes) Taxis, and Single Cache domain 2 network (Lysinibacillus macroides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KOY83931.1	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
	cheB	Chemotaxis protein CheY; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (367 aa)
	KOY82697.1	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. (689 aa)
	KOY82698.1	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)
	KOY82699.1	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
	cheD	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (167 aa)
	KOY83089.1	Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
	KOY83235.1	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
	KOY80360.1	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (564 aa)
	KOY80389.1	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (580 aa)

Your Current Organism:

Lysinibacillus macroides

NCBI taxonomy Id: 33935
Other names: ATCC 12905, Bacillus macroides, DSM 54, L. macroides, LMG 18474, LMG:18474, Lineola longa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KOY80360.1	KOY82697.1	ADM90_21215	ADM90_05020	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
KOY80360.1	KOY82698.1	ADM90_21215	ADM90_05025	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
KOY80360.1	KOY82699.1	ADM90_21215	ADM90_05030	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.711
KOY80360.1	KOY83089.1	ADM90_21215	ADM90_07265	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941
KOY80360.1	KOY83235.1	ADM90_21215	ADM90_08125	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
KOY80360.1	cheB	ADM90_21215	ADM90_05015	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.	0.954
KOY80360.1	cheD	ADM90_21215	ADM90_05035	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.	0.942
KOY80389.1	KOY82697.1	ADM90_21385	ADM90_05020	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
KOY80389.1	KOY82698.1	ADM90_21385	ADM90_05025	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
KOY80389.1	KOY82699.1	ADM90_21385	ADM90_05030	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.674
KOY80389.1	KOY83089.1	ADM90_21385	ADM90_07265	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941
KOY80389.1	KOY83235.1	ADM90_21385	ADM90_08125	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
KOY80389.1	cheB	ADM90_21385	ADM90_05015	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.	0.954
KOY80389.1	cheD	ADM90_21385	ADM90_05035	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.	0.939
KOY82697.1	KOY80360.1	ADM90_05020	ADM90_21215	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
KOY82697.1	KOY80389.1	ADM90_05020	ADM90_21385	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
KOY82697.1	KOY82698.1	ADM90_05020	ADM90_05025	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KOY82697.1	KOY82699.1	ADM90_05020	ADM90_05030	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
KOY82697.1	KOY83089.1	ADM90_05020	ADM90_07265	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
KOY82697.1	KOY83235.1	ADM90_05020	ADM90_08125	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997