(4 nodes) CheW-like domain superfamily network (Lysinibacillus macroides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KOY82698.1	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)
	KOY82464.1	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
	KOY83235.1	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
	KOY82697.1	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. (689 aa)

Your Current Organism:

Lysinibacillus macroides

NCBI taxonomy Id: 33935
Other names: ATCC 12905, Bacillus macroides, DSM 54, L. macroides, LMG 18474, LMG:18474, Lineola longa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KOY82464.1	KOY82697.1	ADM90_03750	ADM90_05020	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KOY82464.1	KOY82698.1	ADM90_03750	ADM90_05025	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
KOY82464.1	KOY83235.1	ADM90_03750	ADM90_08125	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.943
KOY82697.1	KOY82464.1	ADM90_05020	ADM90_03750	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KOY82697.1	KOY82698.1	ADM90_05020	ADM90_05025	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KOY82697.1	KOY83235.1	ADM90_05020	ADM90_08125	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KOY82698.1	KOY82464.1	ADM90_05025	ADM90_03750	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
KOY82698.1	KOY82697.1	ADM90_05025	ADM90_05020	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KOY82698.1	KOY83235.1	ADM90_05025	ADM90_08125	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
KOY83235.1	KOY82464.1	ADM90_08125	ADM90_03750	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.943
KOY83235.1	KOY82697.1	ADM90_08125	ADM90_05020	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KOY83235.1	KOY82698.1	ADM90_08125	ADM90_05025	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964