STRINGSTRING
KOY82283.1 KOY82283.1 KOY81718.1 KOY81718.1 KOY84056.1 KOY84056.1 KOY84073.1 KOY84073.1 KOY84106.1 KOY84106.1 KOY83873.1 KOY83873.1 KOY83859.1 KOY83859.1 KOY82413.1 KOY82413.1 KOY83630.1 KOY83630.1 KOY82512.1 KOY82512.1 KOY82604.1 KOY82604.1 KOY82722.1 KOY82722.1 KOY80787.1 KOY80787.1 KOY82794.1 KOY82794.1 KOY82795.1 KOY82795.1 KOY80760.1 KOY80760.1 rnmV rnmV KOY82796.1 KOY82796.1 KOY82797.1 KOY82797.1 ribBA ribBA KOY81719.1 KOY81719.1 ribH ribH KOY82927.1 KOY82927.1 KOY83694.1 KOY83694.1 KOY82139.1 KOY82139.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KOY82283.1Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (279 aa)
KOY81718.1NAD(P)H nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
KOY84056.1NADH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
KOY84073.1Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa)
KOY84106.1NADPH-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flavin oxidoreductase frp family. (243 aa)
KOY83873.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)
KOY83859.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)
KOY82413.1Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
KOY83630.1Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (302 aa)
KOY82512.1Hydrolase Cof; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
KOY82604.1Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (299 aa)
KOY82722.1Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family. (315 aa)
KOY80787.1NAD(P)H nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
KOY82794.1Hypothetical protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (343 aa)
KOY82795.1Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
KOY80760.1Oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
rnmVRibonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. (188 aa)
KOY82796.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
KOY82797.1Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
ribBA3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. (395 aa)
KOY81719.1NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
ribH6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. (154 aa)
KOY82927.1Sugar phosphatase; YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
KOY83694.1Cobalamin biosynthesis protein CbiY; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
KOY82139.1TOPRIM domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)
Your Current Organism:
Lysinibacillus macroides
NCBI taxonomy Id: 33935
Other names: ATCC 12905, Bacillus macroides, DSM 54, L. macroides, LMG 18474, LMG:18474, Lineola longa
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