(22 nodes) mRNA decay by 3 to 5 exoribonuclease, and Response to virus network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_00960	Uncharacterized protein. (636 aa)
	HCAG_01190	Uncharacterized protein. (249 aa)
	HCAG_01822	RNB domain-containing protein. (1344 aa)
	HCAG_02005	WD_REPEATS_REGION domain-containing protein. (326 aa)
	HCAG_02509	Uncharacterized protein. (289 aa)
	HCAG_03200	RNase_PH domain-containing protein. (440 aa)
	HCAG_03457	ECR1_N domain-containing protein. (372 aa)
	HCAG_04344	Uncharacterized protein. (1313 aa)
	HCAG_04444	RNB domain-containing protein. (909 aa)
	HCAG_04484	RNase_PH domain-containing protein. (291 aa)
	HCAG_05387	KH_dom_type_1 domain-containing protein. (279 aa)
	HCAG_05592	ATP-dependent RNA helicase DOB1. (1081 aa)
	HCAG_06423	Sec2p domain-containing protein. (252 aa)
	HCAG_05897	Uncharacterized protein. (373 aa)
	HCAG_05940	RNase_PH domain-containing protein. (337 aa)
	HCAG_06137	Mitotic control protein dis3. (236 aa)
	HCAG_06138	Mitotic control protein dis3. (459 aa)
	HCAG_07214	Uncharacterized protein. (252 aa)
	HCAG_07286	Uncharacterized protein. (81 aa)
	HCAG_08061	Helicase C-terminal domain-containing protein. (636 aa)
	HCAG_08062	Uncharacterized protein. (289 aa)
	HCAG_08172	Antiviral helicase SKI2. (1298 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00960	HCAG_01822	A6QUA4	A6QWR5	Uncharacterized protein.	RNB domain-containing protein.	0.639
HCAG_00960	HCAG_04444	A6QUA4	A6R486	Uncharacterized protein.	RNB domain-containing protein.	0.828
HCAG_00960	HCAG_05897	A6QUA4	A6RAA9	Uncharacterized protein.	Uncharacterized protein.	0.828
HCAG_00960	HCAG_06137	A6QUA4	A6RAZ9	Uncharacterized protein.	Mitotic control protein dis3.	0.639
HCAG_00960	HCAG_06138	A6QUA4	A6RB00	Uncharacterized protein.	Mitotic control protein dis3.	0.639
HCAG_00960	HCAG_08172	A6QUA4	A6REV7	Uncharacterized protein.	Antiviral helicase SKI2.	0.446
HCAG_01190	HCAG_01822	A6QUY4	A6QWR5	Uncharacterized protein.	RNB domain-containing protein.	0.801
HCAG_01190	HCAG_02509	A6QUY4	A6QYQ2	Uncharacterized protein.	Uncharacterized protein.	0.992
HCAG_01190	HCAG_03200	A6QUY4	A6R0P3	Uncharacterized protein.	RNase_PH domain-containing protein.	0.997
HCAG_01190	HCAG_03457	A6QUY4	A6R1F0	Uncharacterized protein.	ECR1_N domain-containing protein.	0.997
HCAG_01190	HCAG_04444	A6QUY4	A6R486	Uncharacterized protein.	RNB domain-containing protein.	0.688
HCAG_01190	HCAG_04484	A6QUY4	A6R4C6	Uncharacterized protein.	RNase_PH domain-containing protein.	0.982
HCAG_01190	HCAG_05387	A6QUY4	A6R6X9	Uncharacterized protein.	KH_dom_type_1 domain-containing protein.	0.984
HCAG_01190	HCAG_05592	A6QUY4	A6R7I4	Uncharacterized protein.	ATP-dependent RNA helicase DOB1.	0.983
HCAG_01190	HCAG_05897	A6QUY4	A6RAA9	Uncharacterized protein.	Uncharacterized protein.	0.688
HCAG_01190	HCAG_05940	A6QUY4	A6RAF2	Uncharacterized protein.	RNase_PH domain-containing protein.	0.982
HCAG_01190	HCAG_06137	A6QUY4	A6RAZ9	Uncharacterized protein.	Mitotic control protein dis3.	0.869
HCAG_01190	HCAG_06138	A6QUY4	A6RB00	Uncharacterized protein.	Mitotic control protein dis3.	0.869
HCAG_01190	HCAG_06423	A6QUY4	A6R7Y2	Uncharacterized protein.	Sec2p domain-containing protein.	0.960
HCAG_01190	HCAG_07214	A6QUY4	A6RC56	Uncharacterized protein.	Uncharacterized protein.	0.997