(5 nodes) U4 snRNA 3-end processing network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_03200	RNase_PH domain-containing protein. (440 aa)
	HCAG_03457	ECR1_N domain-containing protein. (372 aa)
	HCAG_04484	RNase_PH domain-containing protein. (291 aa)
	HCAG_05387	KH_dom_type_1 domain-containing protein. (279 aa)
	HCAG_07214	Uncharacterized protein. (252 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_03200	HCAG_03457	A6R0P3	A6R1F0	RNase_PH domain-containing protein.	ECR1_N domain-containing protein.	0.999
HCAG_03200	HCAG_04484	A6R0P3	A6R4C6	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
HCAG_03200	HCAG_05387	A6R0P3	A6R6X9	RNase_PH domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.999
HCAG_03200	HCAG_07214	A6R0P3	A6RC56	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
HCAG_03457	HCAG_03200	A6R1F0	A6R0P3	ECR1_N domain-containing protein.	RNase_PH domain-containing protein.	0.999
HCAG_03457	HCAG_04484	A6R1F0	A6R4C6	ECR1_N domain-containing protein.	RNase_PH domain-containing protein.	0.999
HCAG_03457	HCAG_05387	A6R1F0	A6R6X9	ECR1_N domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.999
HCAG_03457	HCAG_07214	A6R1F0	A6RC56	ECR1_N domain-containing protein.	Uncharacterized protein.	0.999
HCAG_04484	HCAG_03200	A6R4C6	A6R0P3	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
HCAG_04484	HCAG_03457	A6R4C6	A6R1F0	RNase_PH domain-containing protein.	ECR1_N domain-containing protein.	0.999
HCAG_04484	HCAG_05387	A6R4C6	A6R6X9	RNase_PH domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.999
HCAG_04484	HCAG_07214	A6R4C6	A6RC56	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
HCAG_05387	HCAG_03200	A6R6X9	A6R0P3	KH_dom_type_1 domain-containing protein.	RNase_PH domain-containing protein.	0.999
HCAG_05387	HCAG_03457	A6R6X9	A6R1F0	KH_dom_type_1 domain-containing protein.	ECR1_N domain-containing protein.	0.999
HCAG_05387	HCAG_04484	A6R6X9	A6R4C6	KH_dom_type_1 domain-containing protein.	RNase_PH domain-containing protein.	0.999
HCAG_05387	HCAG_07214	A6R6X9	A6RC56	KH_dom_type_1 domain-containing protein.	Uncharacterized protein.	0.999
HCAG_07214	HCAG_03200	A6RC56	A6R0P3	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
HCAG_07214	HCAG_03457	A6RC56	A6R1F0	Uncharacterized protein.	ECR1_N domain-containing protein.	0.999
HCAG_07214	HCAG_04484	A6RC56	A6R4C6	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
HCAG_07214	HCAG_05387	A6RC56	A6R6X9	Uncharacterized protein.	KH_dom_type_1 domain-containing protein.	0.999