(24 nodes) Mixed, incl. Prp19 complex, and Generation of catalytic spliceosome for second transesterification step network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_00426	Uncharacterized protein. (277 aa)
	HCAG_00461	SKIP_SNW domain-containing protein. (593 aa)
	HCAG_00976	Pre-mRNA splicing factor cef-1. (793 aa)
	HCAG_01160	Slu7 domain-containing protein. (480 aa)
	HCAG_01240	Cir_N domain-containing protein. (295 aa)
	HCAG_01349	Uncharacterized protein. (295 aa)
	HCAG_01964	Uncharacterized protein. (711 aa)
	HCAG_02132	SFM domain-containing protein. (366 aa)
	HCAG_02506	Uncharacterized protein. (476 aa)
	HCAG_02641	Pre-mRNA splicing factor syf-1. (831 aa)
	HCAG_03057	Cell cycle control protein cwf14. (104 aa)
	HCAG_03365	Uncharacterized protein. (88 aa)
	HCAG_03437	Pre-mRNA splicing factor prp46. (458 aa)
	HCAG_03763	RRM domain-containing protein. (154 aa)
	HCAG_04602	Pre-mRNA splicing factor ATP-dependent RNA helicase prp16. (968 aa)
	HCAG_04758	MI domain-containing protein. (589 aa)
	HCAG_05163	Cwf21 domain-containing protein. (244 aa)
	HCAG_05496	Uncharacterized protein. (219 aa)
	HCAG_05741	Uncharacterized protein. (212 aa)
	HCAG_07308	Uncharacterized protein. (222 aa)
	HCAG_07565	Pre-mRNA splicing factor slt-11. (405 aa)
	HCAG_07757	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1414 aa)
	HCAG_07796	WD_REPEATS_REGION domain-containing protein. (583 aa)
	HCAG_08381	Pre-mRNA splicing factor CWC2. (365 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00426	HCAG_00461	A6QSS0	A6QSV5	Uncharacterized protein.	SKIP_SNW domain-containing protein.	0.970
HCAG_00426	HCAG_00976	A6QSS0	A6QUC0	Uncharacterized protein.	Pre-mRNA splicing factor cef-1.	0.992
HCAG_00426	HCAG_01160	A6QSS0	A6QUV4	Uncharacterized protein.	Slu7 domain-containing protein.	0.918
HCAG_00426	HCAG_01240	A6QSS0	A6QV33	Uncharacterized protein.	Cir_N domain-containing protein.	0.992
HCAG_00426	HCAG_01349	A6QSS0	A6QVE2	Uncharacterized protein.	Uncharacterized protein.	0.985
HCAG_00426	HCAG_01964	A6QSS0	A6QX57	Uncharacterized protein.	Uncharacterized protein.	0.834
HCAG_00426	HCAG_02132	A6QSS0	A6QXM5	Uncharacterized protein.	SFM domain-containing protein.	0.910
HCAG_00426	HCAG_02506	A6QSS0	A6QYP9	Uncharacterized protein.	Uncharacterized protein.	0.983
HCAG_00426	HCAG_02641	A6QSS0	A6QZ34	Uncharacterized protein.	Pre-mRNA splicing factor syf-1.	0.992
HCAG_00426	HCAG_03057	A6QSS0	A6R0A0	Uncharacterized protein.	Cell cycle control protein cwf14.	0.990
HCAG_00426	HCAG_03365	A6QSS0	A6R158	Uncharacterized protein.	Uncharacterized protein.	0.972
HCAG_00426	HCAG_03437	A6QSS0	A6R1D0	Uncharacterized protein.	Pre-mRNA splicing factor prp46.	0.992
HCAG_00426	HCAG_03763	A6QSS0	A6R2A5	Uncharacterized protein.	RRM domain-containing protein.	0.803
HCAG_00426	HCAG_04602	A6QSS0	A6R4P4	Uncharacterized protein.	Pre-mRNA splicing factor ATP-dependent RNA helicase prp16.	0.996
HCAG_00426	HCAG_04758	A6QSS0	A6R550	Uncharacterized protein.	MI domain-containing protein.	0.989
HCAG_00426	HCAG_05163	A6QSS0	A6R6A5	Uncharacterized protein.	Cwf21 domain-containing protein.	0.964
HCAG_00426	HCAG_05496	A6QSS0	A6R788	Uncharacterized protein.	Uncharacterized protein.	0.865
HCAG_00426	HCAG_07308	A6QSS0	A6RCF0	Uncharacterized protein.	Uncharacterized protein.	0.935
HCAG_00426	HCAG_07565	A6QSS0	A6RD57	Uncharacterized protein.	Pre-mRNA splicing factor slt-11.	0.921
HCAG_00426	HCAG_07757	A6QSS0	A6RDP9	Uncharacterized protein.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.828