(11 nodes) mRNA cleavage and polyadenylation specificity factor complex network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_00822	CPSF_A domain-containing protein. (1283 aa)
	HCAG_02036	Uncharacterized protein. (524 aa)
	HCAG_02152	Uncharacterized protein. (925 aa)
	HCAG_02584	WD repeat protein. (362 aa)
	HCAG_02724	DUF3453 domain-containing protein. (849 aa)
	HCAG_04482	Uncharacterized protein. (292 aa)
	HCAG_04743	Uncharacterized protein. (251 aa)
	HCAG_04841	Serine/threonine-protein phosphatase. (253 aa)
	HCAG_04949	Fip1 domain-containing protein. (372 aa)
	HCAG_05441	Cleavage and polyadenylation specificity factor subunit 2. (977 aa)
	HCAG_07349	WD_REPEATS_REGION domain-containing protein. (619 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00822	HCAG_02036	A6QTW6	A6QXC9	CPSF_A domain-containing protein.	Uncharacterized protein.	0.997
HCAG_00822	HCAG_02152	A6QTW6	A6QXP5	CPSF_A domain-containing protein.	Uncharacterized protein.	0.999
HCAG_00822	HCAG_02584	A6QTW6	A6QYX7	CPSF_A domain-containing protein.	WD repeat protein.	0.992
HCAG_00822	HCAG_02724	A6QTW6	A6QZB7	CPSF_A domain-containing protein.	DUF3453 domain-containing protein.	0.999
HCAG_00822	HCAG_04482	A6QTW6	A6R4C4	CPSF_A domain-containing protein.	Uncharacterized protein.	0.992
HCAG_00822	HCAG_04743	A6QTW6	A6R535	CPSF_A domain-containing protein.	Uncharacterized protein.	0.999
HCAG_00822	HCAG_04841	A6QTW6	A6R5D3	CPSF_A domain-containing protein.	Serine/threonine-protein phosphatase.	0.936
HCAG_00822	HCAG_04949	A6QTW6	A6R5P1	CPSF_A domain-containing protein.	Fip1 domain-containing protein.	0.997
HCAG_00822	HCAG_05441	A6QTW6	A6R733	CPSF_A domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
HCAG_00822	HCAG_07349	A6QTW6	A6RCJ1	CPSF_A domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
HCAG_02036	HCAG_00822	A6QXC9	A6QTW6	Uncharacterized protein.	CPSF_A domain-containing protein.	0.997
HCAG_02036	HCAG_02152	A6QXC9	A6QXP5	Uncharacterized protein.	Uncharacterized protein.	0.997
HCAG_02036	HCAG_02584	A6QXC9	A6QYX7	Uncharacterized protein.	WD repeat protein.	0.992
HCAG_02036	HCAG_02724	A6QXC9	A6QZB7	Uncharacterized protein.	DUF3453 domain-containing protein.	0.970
HCAG_02036	HCAG_04482	A6QXC9	A6R4C4	Uncharacterized protein.	Uncharacterized protein.	0.992
HCAG_02036	HCAG_04743	A6QXC9	A6R535	Uncharacterized protein.	Uncharacterized protein.	0.997
HCAG_02036	HCAG_04841	A6QXC9	A6R5D3	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.957
HCAG_02036	HCAG_04949	A6QXC9	A6R5P1	Uncharacterized protein.	Fip1 domain-containing protein.	0.988
HCAG_02036	HCAG_05441	A6QXC9	A6R733	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.996
HCAG_02036	HCAG_07349	A6QXC9	A6RCJ1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998