(30 nodes) Nuclear pore network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_00747	Nup188_C domain-containing protein. (1623 aa)
	HCAG_01097	Uncharacterized protein. (358 aa)
	HCAG_01604	Peptidase S59 domain-containing protein. (1262 aa)
	HCAG_01605	Uncharacterized protein. (281 aa)
	HCAG_01771	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (316 aa)
	HCAG_01772	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (452 aa)
	HCAG_01823	Uncharacterized protein. (503 aa)
	HCAG_01906	Uncharacterized protein. (464 aa)
	HCAG_01986	Poly(A)+ RNA export protein. (345 aa)
	HCAG_02018	Uncharacterized protein. (190 aa)
	HCAG_02023	Uncharacterized protein. (174 aa)
	HCAG_02024	Nucleoporin_C domain-containing protein. (800 aa)
	HCAG_02612	RanBD1 domain-containing protein. (205 aa)
	HCAG_02613	Uncharacterized protein. (765 aa)
	HCAG_03404	Uncharacterized protein. (1301 aa)
	HCAG_03435	Nup54 domain-containing protein. (421 aa)
	HCAG_03621	GTP-binding nuclear protein GSP1/Ran. (418 aa)
	HCAG_03736	NUP214 domain-containing protein. (1472 aa)
	HCAG_04437	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (1109 aa)
	HCAG_04485	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (243 aa)
	HCAG_04525	Nsp1_C domain-containing protein. (628 aa)
	HCAG_04952	Uncharacterized protein. (556 aa)
	HCAG_05208	TPR_MLP1_2 domain-containing protein. (2033 aa)
	HCAG_07102	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (377 aa)
	HCAG_07137	Uncharacterized protein. (1353 aa)
	DBP5	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity). (497 aa)
	HCAG_07669	Uncharacterized protein. (1081 aa)
	HCAG_08042	RanBD1 domain-containing protein. (904 aa)
	HCAG_08819	ELYS domain-containing protein. (342 aa)
	HCAG_08938	Protein transport protein SEC13; Belongs to the WD repeat SEC13 family. (307 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DBP5	HCAG_01097	A6RC50	A6QUP1	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity).	Uncharacterized protein.	0.868
DBP5	HCAG_01604	A6RC50	A6QW47	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity).	Peptidase S59 domain-containing protein.	0.414
DBP5	HCAG_01605	A6RC50	A6QW48	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity).	Uncharacterized protein.	0.414
DBP5	HCAG_01823	A6RC50	A6QWR6	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity).	Uncharacterized protein.	0.971
DBP5	HCAG_01986	A6RC50	A6QX79	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity).	Poly(A)+ RNA export protein.	0.576
DBP5	HCAG_02018	A6RC50	A6QXB1	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity).	Uncharacterized protein.	0.575
DBP5	HCAG_03736	A6RC50	A6R278	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity).	NUP214 domain-containing protein.	0.990
DBP5	HCAG_04525	A6RC50	A6R4G7	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity).	Nsp1_C domain-containing protein.	0.526
DBP5	HCAG_04952	A6RC50	A6R5P4	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity).	Uncharacterized protein.	0.414
HCAG_00747	HCAG_01604	A6QTP1	A6QW47	Nup188_C domain-containing protein.	Peptidase S59 domain-containing protein.	0.878
HCAG_00747	HCAG_01605	A6QTP1	A6QW48	Nup188_C domain-containing protein.	Uncharacterized protein.	0.878
HCAG_00747	HCAG_01771	A6QTP1	A6QWL4	Nup188_C domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.739
HCAG_00747	HCAG_01772	A6QTP1	A6QWL5	Nup188_C domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.739
HCAG_00747	HCAG_01823	A6QTP1	A6QWR6	Nup188_C domain-containing protein.	Uncharacterized protein.	0.537
HCAG_00747	HCAG_01986	A6QTP1	A6QX79	Nup188_C domain-containing protein.	Poly(A)+ RNA export protein.	0.773
HCAG_00747	HCAG_02023	A6QTP1	A6QXB6	Nup188_C domain-containing protein.	Uncharacterized protein.	0.766
HCAG_00747	HCAG_02024	A6QTP1	A6QXB7	Nup188_C domain-containing protein.	Nucleoporin_C domain-containing protein.	0.766
HCAG_00747	HCAG_03404	A6QTP1	A6R197	Nup188_C domain-containing protein.	Uncharacterized protein.	0.906
HCAG_00747	HCAG_03435	A6QTP1	A6R1C8	Nup188_C domain-containing protein.	Nup54 domain-containing protein.	0.953
HCAG_00747	HCAG_03736	A6QTP1	A6R278	Nup188_C domain-containing protein.	NUP214 domain-containing protein.	0.812