(17 nodes) RNAi effector complex, and Pericentric heterochromatin assembly network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_00646	Uncharacterized protein. (884 aa)
	HCAG_00657	AAA_12 domain-containing protein. (313 aa)
	HCAG_00658	AAA_11 domain-containing protein. (516 aa)
	HCAG_00860	Uncharacterized protein. (429 aa)
	HCAG_01617	Uncharacterized protein. (1007 aa)
	HCAG_02659	Uncharacterized protein. (1359 aa)
	HCAG_03938	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1437 aa)
	HCAG_04985	Uncharacterized protein. (183 aa)
	HCAG_06916	RNase III domain-containing protein. (380 aa)
	HCAG_05944	Stc1 domain-containing protein. (289 aa)
	HCAG_06198	Piwi domain-containing protein. (647 aa)
	HCAG_07234	RNA-dependent RNA polymerase. (652 aa)
	HCAG_07618	Piwi domain-containing protein. (157 aa)
	HCAG_07929	Uncharacterized protein. (282 aa)
	HCAG_08218	RNA-dependent RNA polymerase. (1209 aa)
	HCAG_08776	Uncharacterized protein. (902 aa)
	HCAG_08867	AAA_12 domain-containing protein. (386 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00646	HCAG_06916	A6QTE0	A6R9C5	Uncharacterized protein.	RNase III domain-containing protein.	0.502
HCAG_00646	HCAG_07929	A6QTE0	A6RE64	Uncharacterized protein.	Uncharacterized protein.	0.416
HCAG_00646	HCAG_08867	A6QTE0	A6RGV0	Uncharacterized protein.	AAA_12 domain-containing protein.	0.647
HCAG_00657	HCAG_00658	A6QTF1	A6QTF2	AAA_12 domain-containing protein.	AAA_11 domain-containing protein.	0.934
HCAG_00658	HCAG_00657	A6QTF2	A6QTF1	AAA_11 domain-containing protein.	AAA_12 domain-containing protein.	0.934
HCAG_01617	HCAG_02659	A6QW60	A6QZ52	Uncharacterized protein.	Uncharacterized protein.	0.726
HCAG_01617	HCAG_03938	A6QW60	A6R2T0	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.728
HCAG_01617	HCAG_04985	A6QW60	A6R5S7	Uncharacterized protein.	Uncharacterized protein.	0.589
HCAG_01617	HCAG_06916	A6QW60	A6R9C5	Uncharacterized protein.	RNase III domain-containing protein.	0.594
HCAG_01617	HCAG_07929	A6QW60	A6RE64	Uncharacterized protein.	Uncharacterized protein.	0.595
HCAG_02659	HCAG_01617	A6QZ52	A6QW60	Uncharacterized protein.	Uncharacterized protein.	0.726
HCAG_02659	HCAG_06198	A6QZ52	A6RB60	Uncharacterized protein.	Piwi domain-containing protein.	0.726
HCAG_02659	HCAG_06916	A6QZ52	A6R9C5	Uncharacterized protein.	RNase III domain-containing protein.	0.401
HCAG_02659	HCAG_07234	A6QZ52	A6RC76	Uncharacterized protein.	RNA-dependent RNA polymerase.	0.412
HCAG_02659	HCAG_07618	A6QZ52	A6RDB0	Uncharacterized protein.	Piwi domain-containing protein.	0.726
HCAG_02659	HCAG_08218	A6QZ52	A6RF03	Uncharacterized protein.	RNA-dependent RNA polymerase.	0.412
HCAG_02659	HCAG_08776	A6QZ52	A6RGK9	Uncharacterized protein.	Uncharacterized protein.	0.787
HCAG_03938	HCAG_01617	A6R2T0	A6QW60	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.728
HCAG_03938	HCAG_06198	A6R2T0	A6RB60	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Piwi domain-containing protein.	0.729
HCAG_03938	HCAG_06916	A6R2T0	A6R9C5	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	RNase III domain-containing protein.	0.401