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| | HCAG_00018 | Nucleosome binding protein. (102 aa) |
| | HCAG_00038 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (654 aa) |
| | HCAG_00078 | Uncharacterized protein; Belongs to the cyclin family. (1153 aa) |
| | HCAG_00082 | TATA-box binding protein. (268 aa) |
| | MED10 | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (116 aa) |
| | HCAG_00244 | RPOL4c domain-containing protein. (152 aa) |
| | HCAG_00360 | Acyl_transf_3 domain-containing protein. (189 aa) |
| | HCAG_00490 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (378 aa) |
| | HCAG_00496 | Uncharacterized protein. (750 aa) |
| | HCAG_00556 | TAF domain-containing protein. (472 aa) |
| | HCAG_00645 | Uncharacterized protein. (296 aa) |
| | HCAG_00669 | Uncharacterized protein. (270 aa) |
| | HCAG_00749 | BRCT domain-containing protein. (215 aa) |
| | HCAG_00789 | Zn(2)-C6 fungal-type domain-containing protein. (226 aa) |
| | HCAG_00790 | Uncharacterized protein. (193 aa) |
| | MED19 | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (217 aa) |
| | HCAG_00792 | Uncharacterized protein. (248 aa) |
| | HCAG_00846 | Uncharacterized protein. (413 aa) |
| | HCAG_00857 | Uncharacterized protein. (352 aa) |
| | HCAG_00906 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (129 aa) |
| | HCAG_00934 | Helicase C-terminal domain-containing protein. (219 aa) |
| | HCAG_00935 | Uncharacterized protein. (239 aa) |
| | HCAG_01022 | Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa) |
| | HCAG_01023 | Uncharacterized protein. (396 aa) |
| | HCAG_01030 | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1397 aa) |
| | HCAG_01031 | Uncharacterized protein. (213 aa) |
| | HCAG_01109 | Serine/threonine-protein kinase prk1. (274 aa) |
| | HCAG_01155 | Repressor of RNA polymerase III transcription MAF1; Mediator of diverse signals that repress RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family. (303 aa) |
| | HCAG_01174 | Med12 domain-containing protein. (1493 aa) |
| | HCAG_01248 | Uncharacterized protein. (414 aa) |
| | HCAG_01249 | TFIID_20kDa domain-containing protein. (73 aa) |
| | HCAG_01307 | DUF4211 domain-containing protein. (223 aa) |
| | MED20 | Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (376 aa) |
| | HCAG_01346 | Nitroreductase domain-containing protein. (222 aa) |
| | HCAG_01366 | CYCLIN domain-containing protein; Belongs to the cyclin family. (245 aa) |
| | HCAG_01466 | acidPPc domain-containing protein. (373 aa) |
| | HCAG_01496 | Uncharacterized protein. (75 aa) |
| | HCAG_01528 | Uncharacterized protein. (644 aa) |
| | HCAG_01554 | Uncharacterized protein. (393 aa) |
| | HCAG_01862 | Zn(2)-C6 fungal-type domain-containing protein. (608 aa) |
| | HCAG_01901 | Uncharacterized protein. (378 aa) |
| | HCAG_01938 | Uncharacterized protein. (516 aa) |
| | HCAG_01948 | Uncharacterized protein. (392 aa) |
| | HCAG_01955 | Uncharacterized protein. (173 aa) |
| | HCAG_01970 | Uncharacterized protein. (334 aa) |
| | HCAG_02041 | Uncharacterized protein. (1007 aa) |
| | HCAG_02170 | Uncharacterized protein. (267 aa) |
| | HCAG_02360 | Uncharacterized protein. (324 aa) |
| | HCAG_02364 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1747 aa) |
| | HCAG_02380 | Uncharacterized protein. (445 aa) |
| | HCAG_02436 | Uncharacterized protein. (247 aa) |
| | HCAG_02492 | Uncharacterized protein. (210 aa) |
| | HCAG_02629 | Nitrogen assimilation transcription factor nirA. (224 aa) |
| | HCAG_02630 | Nitrogen assimilation transcription factor nirA. (213 aa) |
| | HCAG_02711 | Uncharacterized protein. (693 aa) |
| | HCAG_02781 | Transcription initiation factor TFIId 127kD subunit. (1170 aa) |
| | HCAG_02810 | Uncharacterized protein. (524 aa) |
| | HCAG_02811 | Uncharacterized protein. (169 aa) |
| | HCAG_02833 | Uncharacterized protein. (369 aa) |
| | HCAG_02903 | CYCLIN domain-containing protein; Belongs to the cyclin family. (491 aa) |
| | HCAG_02928 | Uncharacterized protein. (656 aa) |
| | HCAG_02929 | DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (259 aa) |
| | HCAG_03022 | Uncharacterized protein. (410 aa) |
| | HCAG_03024 | Uncharacterized protein. (1227 aa) |
| | HCAG_03109 | Protein kinase domain-containing protein. (238 aa) |
| | HCAG_03119 | Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (180 aa) |
| | HCAG_03230 | ERCC4 domain-containing protein. (876 aa) |
| | HCAG_03337 | Uncharacterized protein. (1111 aa) |
| | HCAG_03355 | HMG box domain-containing protein. (321 aa) |
| | MED16 | Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (861 aa) |
| | HCAG_03433 | TFIIS N-terminal domain-containing protein. (423 aa) |
| | HCAG_03460 | Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1424 aa) |
| | HCAG_03501 | TSPc domain-containing protein. (718 aa) |
| | HCAG_03505 | Helicase ATP-binding domain-containing protein. (501 aa) |
| | HCAG_03627 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1066 aa) |
| | HCAG_03642 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (142 aa) |
| | HCAG_03746 | DUF3591 domain-containing protein. (1092 aa) |
| | HCAG_03784 | Uncharacterized protein. (123 aa) |
| | HCAG_03828 | Uncharacterized protein. (621 aa) |
| | HCAG_03901 | CID domain-containing protein. (246 aa) |
| | HCAG_04046 | Serine/threonine-protein kinase crk1; Belongs to the protein kinase superfamily. (408 aa) |
| | HCAG_04314 | Uncharacterized protein. (1148 aa) |
| | HCAG_04427 | Uncharacterized protein. (510 aa) |
| | HCAG_04441 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1743 aa) |
| | HCAG_04472 | DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (363 aa) |
| | HCAG_04483 | Uncharacterized protein. (990 aa) |
| | HCAG_04624 | DNA-directed RNA polymerases I and III 40 kDa polypeptide. (380 aa) |
| | HCAG_04635 | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (571 aa) |
| | HCAG_04703 | Uncharacterized protein. (632 aa) |
| | HCAG_04738 | Uncharacterized protein. (201 aa) |
| | HCAG_04750 | Uncharacterized protein. (715 aa) |
| | MED11 | Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (171 aa) |
| | HCAG_04864 | DNA-directed RNA polymerases I. (177 aa) |
| | HCAG_04889 | XPA_C domain-containing protein. (359 aa) |
| | HCAG_05015 | Uncharacterized protein. (375 aa) |
| | HCAG_05207 | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (298 aa) |
| | HCAG_05601 | Uncharacterized protein. (282 aa) |
| | MED5 | Mediator of RNA polymerase II transcription subunit 5; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (904 aa) |
| | HCAG_06417 | DNA-directed RNA polymerase II 13.3 kDa polypeptide. (168 aa) |
| | HCAG_06420 | Uncharacterized protein. (600 aa) |
| | HCAG_06518 | Uncharacterized protein. (956 aa) |
| | HCAG_06541 | Uncharacterized protein. (430 aa) |
| | HCAG_06637 | Uncharacterized protein. (818 aa) |
| | HCAG_06714 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1573 aa) |
| | HCAG_06715 | DNA repair helicase RAD3. (683 aa) |
| | HCAG_06723 | Uncharacterized protein. (90 aa) |
| | HCAG_06734 | DNA-directed RNA polymerases II 24 kDa polypeptide. (236 aa) |
| | HCAG_06934 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (506 aa) |
| | HCAG_06971 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1186 aa) |
| | RPC82 | DNA-directed RNA polymerase III subunit rpc3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs (By similarity). (649 aa) |
| | HCAG_05716 | BTB domain-containing protein. (867 aa) |
| | HCAG_05766 | BUD22 domain-containing protein. (261 aa) |
| | HCAG_05775 | Uncharacterized protein. (1056 aa) |
| | HCAG_05801 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. (253 aa) |
| | HCAG_05817 | Mediator of RNA polymerase II transcription subunit 13; Component of the SRB8-11 complex. The SRB8-11 complex is a regulatory module of the Mediator complex which is itself involved in regulation of basal and activated RNA polymerase II-dependent transcription. The SRB8-11 complex may be involved in the transcriptional repression of a subset of genes regulated by Mediator. It may inhibit the association of the Mediator complex with RNA polymerase II to form the holoenzyme complex. (1396 aa) |
| | HCAG_05890 | Uncharacterized protein. (734 aa) |
| | HCAG_05909 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1214 aa) |
| | HCAG_05932 | RPOLD domain-containing protein. (576 aa) |
| | HCAG_05970 | Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (178 aa) |
| | HCAG_05975 | Uncharacterized protein. (117 aa) |
| | MED8 | Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (256 aa) |
| | HCAG_06230 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1080 aa) |
| | HCAG_07029 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (426 aa) |
| | HCAG_07030 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (503 aa) |
| | HCAG_07060 | Chromatin remodelling complex ATPase chain ISW1. (974 aa) |
| | HCAG_07073 | RING-type domain-containing protein. (379 aa) |
| | HCAG_07118 | Uncharacterized protein. (434 aa) |
| | HCAG_07148 | Uncharacterized protein. (129 aa) |
| | HCAG_07177 | Uncharacterized protein. (909 aa) |
| | HCAG_07353 | HTH TFE/IIEalpha-type domain-containing protein. (441 aa) |
| | HCAG_07360 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (104 aa) |
| | MED17 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (737 aa) |
| | HCAG_07588 | Uncharacterized protein. (248 aa) |
| | HCAG_07638 | Uncharacterized protein. (720 aa) |
| | HCAG_07759 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (455 aa) |
| | HCAG_07806 | Sulfatase domain-containing protein. (673 aa) |
| | HCAG_07807 | Uncharacterized protein. (254 aa) |
| | HCAG_07839 | CDC73_C domain-containing protein. (519 aa) |
| | HCAG_07869 | WD_REPEATS_REGION domain-containing protein. (432 aa) |
| | HCAG_07976 | Acyl_transf_3 domain-containing protein. (459 aa) |
| | HCAG_08011 | Uncharacterized protein. (323 aa) |
| | HCAG_08069 | Uncharacterized protein. (544 aa) |
| | HCAG_08091 | RTR1-type domain-containing protein. (449 aa) |
| | HCAG_08217 | Uncharacterized protein. (398 aa) |
| | HCAG_08221 | Uncharacterized protein. (1745 aa) |
| | HCAG_08226 | RNA_pol_L_2 domain-containing protein. (137 aa) |
| | HCAG_08238 | FCP1 homology domain-containing protein. (700 aa) |
| | HCAG_08245 | SANT domain-containing protein. (542 aa) |
| | HCAG_08300 | BTP domain-containing protein. (214 aa) |
| | HCAG_08301 | TAFII55_N domain-containing protein. (559 aa) |
| | HCAG_08376 | Spt4 domain-containing protein. (204 aa) |
| | HCAG_08461 | Uncharacterized protein. (889 aa) |
| | MED4 | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (358 aa) |
| | HCAG_08702 | DNA repair and recombination protein RAD26. (1275 aa) |
| | DBP2 | ATP-dependent RNA helicase DBP2; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. (542 aa) |
| | HCAG_08791 | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (172 aa) |
| | HCAG_08797 | RPOL9 domain-containing protein. (140 aa) |
| | HCAG_08803 | Transcription initiation factor IIB. (352 aa) |
| | HCAG_08810 | Uncharacterized protein. (684 aa) |
| | HCAG_08845 | Plus3 domain-containing protein. (637 aa) |
| | HCAG_08886 | Uncharacterized protein. (371 aa) |
| | HCAG_08895 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1439 aa) |
| | HCAG_08910 | DNA repair protein Rex1. (72 aa) |
| | HCAG_09035 | Uncharacterized protein. (884 aa) |
