(6 nodes) Organellar small ribosomal subunit network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_00736	Uncharacterized protein. (113 aa)
	HCAG_05505	Uncharacterized protein. (424 aa)
	HCAG_06367	Uncharacterized protein. (503 aa)
	HCAG_06812	Uncharacterized protein. (321 aa)
	HCAG_06035	Ribosomal_S7 domain-containing protein. (419 aa)
	HCAG_08235	40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family. (312 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00736	HCAG_05505	A6QTN0	A6R797	Uncharacterized protein.	Uncharacterized protein.	0.999
HCAG_00736	HCAG_06035	A6QTN0	A6RAP7	Uncharacterized protein.	Ribosomal_S7 domain-containing protein.	0.999
HCAG_00736	HCAG_06367	A6QTN0	A6R7S6	Uncharacterized protein.	Uncharacterized protein.	0.999
HCAG_00736	HCAG_06812	A6QTN0	A6R921	Uncharacterized protein.	Uncharacterized protein.	0.999
HCAG_00736	HCAG_08235	A6QTN0	A6RF20	Uncharacterized protein.	40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.	0.999
HCAG_05505	HCAG_00736	A6R797	A6QTN0	Uncharacterized protein.	Uncharacterized protein.	0.999
HCAG_05505	HCAG_06035	A6R797	A6RAP7	Uncharacterized protein.	Ribosomal_S7 domain-containing protein.	0.999
HCAG_05505	HCAG_06367	A6R797	A6R7S6	Uncharacterized protein.	Uncharacterized protein.	0.999
HCAG_05505	HCAG_06812	A6R797	A6R921	Uncharacterized protein.	Uncharacterized protein.	0.999
HCAG_05505	HCAG_08235	A6R797	A6RF20	Uncharacterized protein.	40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.	0.999
HCAG_06035	HCAG_00736	A6RAP7	A6QTN0	Ribosomal_S7 domain-containing protein.	Uncharacterized protein.	0.999
HCAG_06035	HCAG_05505	A6RAP7	A6R797	Ribosomal_S7 domain-containing protein.	Uncharacterized protein.	0.999
HCAG_06035	HCAG_06367	A6RAP7	A6R7S6	Ribosomal_S7 domain-containing protein.	Uncharacterized protein.	0.999
HCAG_06035	HCAG_06812	A6RAP7	A6R921	Ribosomal_S7 domain-containing protein.	Uncharacterized protein.	0.999
HCAG_06035	HCAG_08235	A6RAP7	A6RF20	Ribosomal_S7 domain-containing protein.	40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.	0.999
HCAG_06367	HCAG_00736	A6R7S6	A6QTN0	Uncharacterized protein.	Uncharacterized protein.	0.999
HCAG_06367	HCAG_05505	A6R7S6	A6R797	Uncharacterized protein.	Uncharacterized protein.	0.999
HCAG_06367	HCAG_06035	A6R7S6	A6RAP7	Uncharacterized protein.	Ribosomal_S7 domain-containing protein.	0.999
HCAG_06367	HCAG_06812	A6R7S6	A6R921	Uncharacterized protein.	Uncharacterized protein.	0.999
HCAG_06367	HCAG_08235	A6R7S6	A6RF20	Uncharacterized protein.	40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.	0.999