(6 nodes) Mixed, incl. Ribosomal protein L23, and Ribosomal protein L30p/L7e network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_00106	Uncharacterized protein. (185 aa)
	HCAG_02664	Uncharacterized protein. (224 aa)
	HCAG_06543	MRP-L46 domain-containing protein. (331 aa)
	HCAG_06028	Uncharacterized protein. (166 aa)
	HCAG_06104	Ribosomal_L30 domain-containing protein. (94 aa)
	MRPL4	54S ribosomal protein L4, mitochondrial; Belongs to the universal ribosomal protein uL29 family. (248 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00106	HCAG_02664	A6QRV0	A6QZ57	Uncharacterized protein.	Uncharacterized protein.	0.970
HCAG_00106	HCAG_06028	A6QRV0	A6RAP0	Uncharacterized protein.	Uncharacterized protein.	0.985
HCAG_00106	HCAG_06104	A6QRV0	A6RAW6	Uncharacterized protein.	Ribosomal_L30 domain-containing protein.	0.978
HCAG_00106	HCAG_06543	A6QRV0	A6R8A2	Uncharacterized protein.	MRP-L46 domain-containing protein.	0.995
HCAG_00106	MRPL4	A6QRV0	A6RDX3	Uncharacterized protein.	54S ribosomal protein L4, mitochondrial; Belongs to the universal ribosomal protein uL29 family.	0.989
HCAG_02664	HCAG_00106	A6QZ57	A6QRV0	Uncharacterized protein.	Uncharacterized protein.	0.970
HCAG_02664	HCAG_06028	A6QZ57	A6RAP0	Uncharacterized protein.	Uncharacterized protein.	0.995
HCAG_02664	HCAG_06104	A6QZ57	A6RAW6	Uncharacterized protein.	Ribosomal_L30 domain-containing protein.	0.989
HCAG_02664	HCAG_06543	A6QZ57	A6R8A2	Uncharacterized protein.	MRP-L46 domain-containing protein.	0.991
HCAG_02664	MRPL4	A6QZ57	A6RDX3	Uncharacterized protein.	54S ribosomal protein L4, mitochondrial; Belongs to the universal ribosomal protein uL29 family.	0.994
HCAG_06028	HCAG_00106	A6RAP0	A6QRV0	Uncharacterized protein.	Uncharacterized protein.	0.985
HCAG_06028	HCAG_02664	A6RAP0	A6QZ57	Uncharacterized protein.	Uncharacterized protein.	0.995
HCAG_06028	HCAG_06104	A6RAP0	A6RAW6	Uncharacterized protein.	Ribosomal_L30 domain-containing protein.	0.985
HCAG_06028	HCAG_06543	A6RAP0	A6R8A2	Uncharacterized protein.	MRP-L46 domain-containing protein.	0.989
HCAG_06028	MRPL4	A6RAP0	A6RDX3	Uncharacterized protein.	54S ribosomal protein L4, mitochondrial; Belongs to the universal ribosomal protein uL29 family.	0.991
HCAG_06104	HCAG_00106	A6RAW6	A6QRV0	Ribosomal_L30 domain-containing protein.	Uncharacterized protein.	0.978
HCAG_06104	HCAG_02664	A6RAW6	A6QZ57	Ribosomal_L30 domain-containing protein.	Uncharacterized protein.	0.989
HCAG_06104	HCAG_06028	A6RAW6	A6RAP0	Ribosomal_L30 domain-containing protein.	Uncharacterized protein.	0.985
HCAG_06104	HCAG_06543	A6RAW6	A6R8A2	Ribosomal_L30 domain-containing protein.	MRP-L46 domain-containing protein.	0.967
HCAG_06104	MRPL4	A6RAW6	A6RDX3	Ribosomal_L30 domain-containing protein.	54S ribosomal protein L4, mitochondrial; Belongs to the universal ribosomal protein uL29 family.	0.991