(30 nodes) TRAPP complex, and Cargo concentration in the ER network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_00115	Uncharacterized protein. (337 aa)
	HCAG_00248	Uncharacterized protein. (572 aa)
	HCAG_01014	Uncharacterized protein. (807 aa)
	HCAG_01042	DDHD domain-containing protein. (386 aa)
	HCAG_01043	Uncharacterized protein. (1110 aa)
	HCAG_01973	Uncharacterized protein. (1113 aa)
	HCAG_02546	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic. (254 aa)
	HCAG_03011	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (168 aa)
	HCAG_03018	Uncharacterized protein. (702 aa)
	HCAG_03383	Uncharacterized protein. (542 aa)
	HCAG_03467	Uncharacterized protein. (270 aa)
	HCAG_03468	Uncharacterized protein. (596 aa)
	HCAG_03489	Anucleate primary sterigmata protein B. (1922 aa)
	HCAG_03764	WD_REPEATS_REGION domain-containing protein. (1265 aa)
	HCAG_04403	Trafficking protein particle complex subunit BET3. (193 aa)
	HCAG_04789	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (668 aa)
	HCAG_04840	GTP-binding protein sarA; Belongs to the small GTPase superfamily. SAR1 family. (189 aa)
	HCAG_05119	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. (1705 aa)
	HCAG_05252	Uncharacterized protein. (933 aa)
	HCAG_05443	Uncharacterized protein. (256 aa)
	HCAG_05444	Uncharacterized protein. (667 aa)
	HCAG_06509	Uncharacterized protein. (770 aa)
	HCAG_06520	L-type lectin-like domain-containing protein. (415 aa)
	HCAG_06902	Uncharacterized protein. (70 aa)
	HCAG_07326	Uncharacterized protein. (81 aa)
	HCAG_07460	DDHD domain-containing protein. (424 aa)
	HCAG_07797	ER-derived vesicles protein ERV14. (134 aa)
	HCAG_08222	Uncharacterized protein. (1463 aa)
	HCAG_08975	Uncharacterized protein. (177 aa)
	HCAG_09244	Uncharacterized protein. (387 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00115	HCAG_00248	A6QRV9	A6QS92	Uncharacterized protein.	Uncharacterized protein.	0.977
HCAG_00115	HCAG_01973	A6QRV9	A6QX66	Uncharacterized protein.	Uncharacterized protein.	0.990
HCAG_00115	HCAG_02546	A6QRV9	A6QYT9	Uncharacterized protein.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.978
HCAG_00115	HCAG_03011	A6QRV9	A6R054	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.978
HCAG_00115	HCAG_03489	A6QRV9	A6R1I2	Uncharacterized protein.	Anucleate primary sterigmata protein B.	0.595
HCAG_00115	HCAG_04403	A6QRV9	A6R445	Uncharacterized protein.	Trafficking protein particle complex subunit BET3.	0.979
HCAG_00115	HCAG_06509	A6QRV9	A6R868	Uncharacterized protein.	Uncharacterized protein.	0.988
HCAG_00115	HCAG_06902	A6QRV9	A6R9B1	Uncharacterized protein.	Uncharacterized protein.	0.970
HCAG_00115	HCAG_07326	A6QRV9	A6RCG8	Uncharacterized protein.	Uncharacterized protein.	0.969
HCAG_00115	HCAG_08222	A6QRV9	A6RF07	Uncharacterized protein.	Uncharacterized protein.	0.967
HCAG_00115	HCAG_08975	A6QRV9	A6RH58	Uncharacterized protein.	Uncharacterized protein.	0.983
HCAG_00248	HCAG_00115	A6QS92	A6QRV9	Uncharacterized protein.	Uncharacterized protein.	0.977
HCAG_00248	HCAG_01014	A6QS92	A6QUF8	Uncharacterized protein.	Uncharacterized protein.	0.621
HCAG_00248	HCAG_01973	A6QS92	A6QX66	Uncharacterized protein.	Uncharacterized protein.	0.990
HCAG_00248	HCAG_02546	A6QS92	A6QYT9	Uncharacterized protein.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.999
HCAG_00248	HCAG_03011	A6QS92	A6R054	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
HCAG_00248	HCAG_03383	A6QS92	A6R176	Uncharacterized protein.	Uncharacterized protein.	0.831
HCAG_00248	HCAG_03467	A6QS92	A6R1G0	Uncharacterized protein.	Uncharacterized protein.	0.550
HCAG_00248	HCAG_03468	A6QS92	A6R1G1	Uncharacterized protein.	Uncharacterized protein.	0.550
HCAG_00248	HCAG_03489	A6QS92	A6R1I2	Uncharacterized protein.	Anucleate primary sterigmata protein B.	0.922