(10 nodes) Snf7 family, and MIT domain superfamily network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_01600	Uncharacterized protein. (354 aa)
	HCAG_01966	Uncharacterized protein. (211 aa)
	HCAG_02484	Uncharacterized protein. (228 aa)
	HCAG_04796	Vta1 domain-containing protein. (279 aa)
	HCAG_05411	Vacuolar protein sorting-associated protein VPS4; Belongs to the AAA ATPase family. (353 aa)
	HCAG_05491	Uncharacterized protein. (223 aa)
	HCAG_06510	Uncharacterized protein. (495 aa)
	HCAG_06719	Uncharacterized protein. (412 aa)
	HCAG_07627	Uncharacterized protein. (209 aa)
	HCAG_08344	Uncharacterized protein. (227 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_01600	HCAG_01966	A6QW43	A6QX59	Uncharacterized protein.	Uncharacterized protein.	0.862
HCAG_01600	HCAG_02484	A6QW43	A6QYM7	Uncharacterized protein.	Uncharacterized protein.	0.965
HCAG_01600	HCAG_04796	A6QW43	A6R588	Uncharacterized protein.	Vta1 domain-containing protein.	0.998
HCAG_01600	HCAG_05411	A6QW43	A6R703	Uncharacterized protein.	Vacuolar protein sorting-associated protein VPS4; Belongs to the AAA ATPase family.	0.990
HCAG_01600	HCAG_05491	A6QW43	A6R783	Uncharacterized protein.	Uncharacterized protein.	0.978
HCAG_01600	HCAG_06510	A6QW43	A6R869	Uncharacterized protein.	Uncharacterized protein.	0.803
HCAG_01600	HCAG_06719	A6QW43	A6R8S8	Uncharacterized protein.	Uncharacterized protein.	0.946
HCAG_01600	HCAG_07627	A6QW43	A6RDB9	Uncharacterized protein.	Uncharacterized protein.	0.948
HCAG_01600	HCAG_08344	A6QW43	A6RFC8	Uncharacterized protein.	Uncharacterized protein.	0.935
HCAG_01966	HCAG_01600	A6QX59	A6QW43	Uncharacterized protein.	Uncharacterized protein.	0.862
HCAG_01966	HCAG_02484	A6QX59	A6QYM7	Uncharacterized protein.	Uncharacterized protein.	0.986
HCAG_01966	HCAG_04796	A6QX59	A6R588	Uncharacterized protein.	Vta1 domain-containing protein.	0.830
HCAG_01966	HCAG_05411	A6QX59	A6R703	Uncharacterized protein.	Vacuolar protein sorting-associated protein VPS4; Belongs to the AAA ATPase family.	0.994
HCAG_01966	HCAG_05491	A6QX59	A6R783	Uncharacterized protein.	Uncharacterized protein.	0.995
HCAG_01966	HCAG_06510	A6QX59	A6R869	Uncharacterized protein.	Uncharacterized protein.	0.966
HCAG_01966	HCAG_06719	A6QX59	A6R8S8	Uncharacterized protein.	Uncharacterized protein.	0.898
HCAG_01966	HCAG_07627	A6QX59	A6RDB9	Uncharacterized protein.	Uncharacterized protein.	0.731
HCAG_01966	HCAG_08344	A6QX59	A6RFC8	Uncharacterized protein.	Uncharacterized protein.	0.985
HCAG_02484	HCAG_01600	A6QYM7	A6QW43	Uncharacterized protein.	Uncharacterized protein.	0.965
HCAG_02484	HCAG_01966	A6QYM7	A6QX59	Uncharacterized protein.	Uncharacterized protein.	0.986