(5 nodes) Multivesicular body network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_01600	Uncharacterized protein. (354 aa)
	HCAG_02484	Uncharacterized protein. (228 aa)
	HCAG_04796	Vta1 domain-containing protein. (279 aa)
	HCAG_05411	Vacuolar protein sorting-associated protein VPS4; Belongs to the AAA ATPase family. (353 aa)
	HCAG_07627	Uncharacterized protein. (209 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_01600	HCAG_02484	A6QW43	A6QYM7	Uncharacterized protein.	Uncharacterized protein.	0.965
HCAG_01600	HCAG_04796	A6QW43	A6R588	Uncharacterized protein.	Vta1 domain-containing protein.	0.998
HCAG_01600	HCAG_05411	A6QW43	A6R703	Uncharacterized protein.	Vacuolar protein sorting-associated protein VPS4; Belongs to the AAA ATPase family.	0.990
HCAG_01600	HCAG_07627	A6QW43	A6RDB9	Uncharacterized protein.	Uncharacterized protein.	0.948
HCAG_02484	HCAG_01600	A6QYM7	A6QW43	Uncharacterized protein.	Uncharacterized protein.	0.965
HCAG_02484	HCAG_04796	A6QYM7	A6R588	Uncharacterized protein.	Vta1 domain-containing protein.	0.892
HCAG_02484	HCAG_05411	A6QYM7	A6R703	Uncharacterized protein.	Vacuolar protein sorting-associated protein VPS4; Belongs to the AAA ATPase family.	0.993
HCAG_02484	HCAG_07627	A6QYM7	A6RDB9	Uncharacterized protein.	Uncharacterized protein.	0.998
HCAG_04796	HCAG_01600	A6R588	A6QW43	Vta1 domain-containing protein.	Uncharacterized protein.	0.998
HCAG_04796	HCAG_02484	A6R588	A6QYM7	Vta1 domain-containing protein.	Uncharacterized protein.	0.892
HCAG_04796	HCAG_05411	A6R588	A6R703	Vta1 domain-containing protein.	Vacuolar protein sorting-associated protein VPS4; Belongs to the AAA ATPase family.	0.999
HCAG_04796	HCAG_07627	A6R588	A6RDB9	Vta1 domain-containing protein.	Uncharacterized protein.	0.999
HCAG_05411	HCAG_01600	A6R703	A6QW43	Vacuolar protein sorting-associated protein VPS4; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.990
HCAG_05411	HCAG_02484	A6R703	A6QYM7	Vacuolar protein sorting-associated protein VPS4; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.993
HCAG_05411	HCAG_04796	A6R703	A6R588	Vacuolar protein sorting-associated protein VPS4; Belongs to the AAA ATPase family.	Vta1 domain-containing protein.	0.999
HCAG_05411	HCAG_07627	A6R703	A6RDB9	Vacuolar protein sorting-associated protein VPS4; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.997
HCAG_07627	HCAG_01600	A6RDB9	A6QW43	Uncharacterized protein.	Uncharacterized protein.	0.948
HCAG_07627	HCAG_02484	A6RDB9	A6QYM7	Uncharacterized protein.	Uncharacterized protein.	0.998
HCAG_07627	HCAG_04796	A6RDB9	A6R588	Uncharacterized protein.	Vta1 domain-containing protein.	0.999
HCAG_07627	HCAG_05411	A6RDB9	A6R703	Uncharacterized protein.	Vacuolar protein sorting-associated protein VPS4; Belongs to the AAA ATPase family.	0.997