STRINGSTRING
RRP3 RRP3 HCAG_00460 HCAG_00460 HCAG_00604 HCAG_00604 HCAG_00624 HCAG_00624 HCAG_00750 HCAG_00750 HCAG_00829 HCAG_00829 HCAG_00964 HCAG_00964 HCAG_00965 HCAG_00965 HCAG_01076 HCAG_01076 HCAG_01259 HCAG_01259 HCAG_01688 HCAG_01688 HCAG_01788 HCAG_01788 HCAG_01922 HCAG_01922 HCAG_01957 HCAG_01957 HCAG_02172 HCAG_02172 HCAG_02340 HCAG_02340 HCAG_02358 HCAG_02358 NOP58 NOP58 HCAG_02441 HCAG_02441 HCAG_02665 HCAG_02665 HCAG_02749 HCAG_02749 HCAG_02827 HCAG_02827 HCAG_03539 HCAG_03539 HCAG_03549 HCAG_03549 HCAG_03698 HCAG_03698 HCAG_03776 HCAG_03776 HCAG_03777 HCAG_03777 HCAG_03862 HCAG_03862 HCAG_03870 HCAG_03870 HCAG_04100 HCAG_04100 HCAG_04171 HCAG_04171 HCAG_04197 HCAG_04197 HCAG_04202 HCAG_04202 HCAG_04413 HCAG_04413 HCAG_04707 HCAG_04707 NAT10 NAT10 HCAG_05088 HCAG_05088 HCAG_05164 HCAG_05164 HCAG_05175 HCAG_05175 HCAG_05176 HCAG_05176 HCAG_05361 HCAG_05361 HCAG_05421 HCAG_05421 HCAG_05422 HCAG_05422 HCAG_05451 HCAG_05451 HCAG_06909 HCAG_06909 HCAG_05783 HCAG_05783 HCAG_05816 HCAG_05816 HCAG_05902 HCAG_05902 HCAG_05984 HCAG_05984 HCAG_06029 HCAG_06029 HCAG_07125 HCAG_07125 HCAG_07279 HCAG_07279 HCAG_07280 HCAG_07280 HCAG_07626 HCAG_07626 HCAG_07646 HCAG_07646 HCAG_07649 HCAG_07649 HCAG_07899 HCAG_07899 HCAG_07980 HCAG_07980 RRP36 RRP36 HCAG_08551 HCAG_08551 HCAG_08614 HCAG_08614 HCAG_08848 HCAG_08848 HCAG_08862 HCAG_08862 HCAG_09041 HCAG_09041 HCAG_09093 HCAG_09093 HCAG_09128 HCAG_09128 HCAG_09276 HCAG_09276
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RRP3ATP-dependent rRNA helicase RRP3; ATP-dependent rRNA helicase required for pre-ribosomal RNA processing. Involved in the maturation of the 35S-pre-rRNA and to its cleavage to mature 18S rRNA. (485 aa)
HCAG_00460Periodic tryptophan protein 2. (935 aa)
HCAG_0060420S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (439 aa)
HCAG_00624Uncharacterized protein. (372 aa)
HCAG_00750U3 small nucleolar ribonucleoprotein protein IMP4. (315 aa)
HCAG_00829Uncharacterized protein. (904 aa)
HCAG_00964Uncharacterized protein. (68 aa)
HCAG_00965Uncharacterized protein. (403 aa)
HCAG_01076RNA helicase. (721 aa)
HCAG_01259Nucleolar essential protein 1. (258 aa)
HCAG_01688Utp12 domain-containing protein. (905 aa)
HCAG_01788Sas10 domain-containing protein. (737 aa)
HCAG_01922Uncharacterized protein; Belongs to the DEAD box helicase family. (452 aa)
HCAG_01957U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (621 aa)
HCAG_02172Uncharacterized protein. (433 aa)
HCAG_02340Fibrillarin. (213 aa)
HCAG_02358U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (268 aa)
NOP58Nucleolar protein 58; Required for pre-18S rRNA processing. May bind microtubules (By similarity); Belongs to the NOP5/NOP56 family. (635 aa)
HCAG_02441WD_REPEATS_REGION domain-containing protein. (328 aa)
HCAG_02665RIO domain-containing protein. (279 aa)
HCAG_02749Uncharacterized protein. (227 aa)
HCAG_02827CBF domain-containing protein. (428 aa)
HCAG_03539U3 small nucleolar RNA-associated protein 22. (1060 aa)
HCAG_03549WD_REPEATS_REGION domain-containing protein. (1029 aa)
HCAG_03698Uncharacterized protein. (90 aa)
HCAG_03776WD_REPEATS_REGION domain-containing protein. (545 aa)
HCAG_03777Bms1-type G domain-containing protein. (768 aa)
HCAG_03862Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (566 aa)
HCAG_03870Uncharacterized protein. (324 aa)
HCAG_04100KH domain-containing protein. (264 aa)
HCAG_04171Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
HCAG_04197WD_REPEATS_REGION domain-containing protein. (641 aa)
HCAG_04202WD_REPEATS_REGION domain-containing protein. (957 aa)
HCAG_04413Uncharacterized protein. (316 aa)
HCAG_04707WD_REPEATS_REGION domain-containing protein. (961 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1068 aa)
HCAG_05088mRNA export factor elf1. (1103 aa)
HCAG_05164Uncharacterized protein. (1175 aa)
HCAG_05175BP28CT domain-containing protein. (1015 aa)
HCAG_05176U3snoRNP10 domain-containing protein. (689 aa)
HCAG_05361Casein kinase I isoform delta; Belongs to the protein kinase superfamily. (369 aa)
HCAG_05421Nop domain-containing protein. (483 aa)
HCAG_05422NOP5NT domain-containing protein. (185 aa)
HCAG_05451Uncharacterized protein. (398 aa)
HCAG_06909Fcf2 domain-containing protein. (238 aa)
HCAG_05783Uncharacterized protein. (521 aa)
HCAG_05816NUC153 domain-containing protein. (662 aa)
HCAG_05902Uncharacterized protein. (2307 aa)
HCAG_05984Ribosome biogenesis protein BMS1. (1039 aa)
HCAG_06029Uncharacterized protein. (900 aa)
HCAG_07125KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (334 aa)
HCAG_07279Uncharacterized protein. (566 aa)
HCAG_07280Uncharacterized protein. (799 aa)
HCAG_07626Bystin. (472 aa)
HCAG_07646WD_REPEATS_REGION domain-containing protein. (1133 aa)
HCAG_07649PINc domain-containing protein. (197 aa)
HCAG_07899Uncharacterized protein. (448 aa)
HCAG_07980WD_REPEATS_REGION domain-containing protein. (1041 aa)
RRP36rRNA biogenesis protein RRP36; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity). (345 aa)
HCAG_08551Uncharacterized protein. (148 aa)
HCAG_08614Uncharacterized protein. (405 aa)
HCAG_08848MI domain-containing protein. (892 aa)
HCAG_08862WD_REPEATS_REGION domain-containing protein. (571 aa)
HCAG_09041Uncharacterized protein. (417 aa)
HCAG_09093Uncharacterized protein. (367 aa)
HCAG_09128Uncharacterized protein. (153 aa)
HCAG_09276WD_REPEATS_REGION domain-containing protein. (239 aa)
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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