(10 nodes) Preribosome, small subunit precursor, and Large family of predicted nucleotide-binding domains network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_00829	Uncharacterized protein. (904 aa)
	HCAG_01259	Nucleolar essential protein 1. (258 aa)
	HCAG_01788	Sas10 domain-containing protein. (737 aa)
	HCAG_02358	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (268 aa)
	HCAG_02441	WD_REPEATS_REGION domain-containing protein. (328 aa)
	HCAG_02827	CBF domain-containing protein. (428 aa)
	HCAG_03776	WD_REPEATS_REGION domain-containing protein. (545 aa)
	HCAG_05902	Uncharacterized protein. (2307 aa)
	HCAG_07125	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (334 aa)
	HCAG_07649	PINc domain-containing protein. (197 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00829	HCAG_01259	A6QTX3	A6QV52	Uncharacterized protein.	Nucleolar essential protein 1.	0.999
HCAG_00829	HCAG_01788	A6QTX3	A6QWN1	Uncharacterized protein.	Sas10 domain-containing protein.	0.999
HCAG_00829	HCAG_02358	A6QTX3	A6QYA1	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.997
HCAG_00829	HCAG_02441	A6QTX3	A6QYI4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.997
HCAG_00829	HCAG_02827	A6QTX3	A6QZM0	Uncharacterized protein.	CBF domain-containing protein.	0.999
HCAG_00829	HCAG_03776	A6QTX3	A6R2B8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
HCAG_00829	HCAG_05902	A6QTX3	A6RAB4	Uncharacterized protein.	Uncharacterized protein.	0.999
HCAG_00829	HCAG_07125	A6QTX3	A6RBW7	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
HCAG_00829	HCAG_07649	A6QTX3	A6RDE1	Uncharacterized protein.	PINc domain-containing protein.	0.994
HCAG_01259	HCAG_00829	A6QV52	A6QTX3	Nucleolar essential protein 1.	Uncharacterized protein.	0.999
HCAG_01259	HCAG_01788	A6QV52	A6QWN1	Nucleolar essential protein 1.	Sas10 domain-containing protein.	0.994
HCAG_01259	HCAG_02358	A6QV52	A6QYA1	Nucleolar essential protein 1.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.997
HCAG_01259	HCAG_02441	A6QV52	A6QYI4	Nucleolar essential protein 1.	WD_REPEATS_REGION domain-containing protein.	0.997
HCAG_01259	HCAG_02827	A6QV52	A6QZM0	Nucleolar essential protein 1.	CBF domain-containing protein.	0.999
HCAG_01259	HCAG_03776	A6QV52	A6R2B8	Nucleolar essential protein 1.	WD_REPEATS_REGION domain-containing protein.	0.995
HCAG_01259	HCAG_05902	A6QV52	A6RAB4	Nucleolar essential protein 1.	Uncharacterized protein.	0.995
HCAG_01259	HCAG_07125	A6QV52	A6RBW7	Nucleolar essential protein 1.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
HCAG_01259	HCAG_07649	A6QV52	A6RDE1	Nucleolar essential protein 1.	PINc domain-containing protein.	0.998
HCAG_01788	HCAG_00829	A6QWN1	A6QTX3	Sas10 domain-containing protein.	Uncharacterized protein.	0.999
HCAG_01788	HCAG_01259	A6QWN1	A6QV52	Sas10 domain-containing protein.	Nucleolar essential protein 1.	0.994