(61 nodes) Regulation of chromosome organization network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_05139	CLPTM1 domain protein. (648 aa)
	HCAG_05203	Ubiquitin-conjugating enzyme E2-20 kDa; Belongs to the ubiquitin-conjugating enzyme family. (185 aa)
	HCAG_05298	Uncharacterized protein. (365 aa)
	HCAG_05299	Uncharacterized protein. (189 aa)
	HCAG_05518	Uncharacterized protein. (583 aa)
	HCAG_06454	Telo_bind domain-containing protein. (645 aa)
	HCAG_06685	Uncharacterized protein. (732 aa)
	HCAG_06808	XPGI domain-containing protein. (826 aa)
	HCAG_06912	RRM domain-containing protein. (701 aa)
	HCAG_05893	BUB1 N-terminal domain-containing protein. (331 aa)
	HCAG_05894	Protein kinase domain-containing protein. (326 aa)
	HCAG_05945	Stn1 domain-containing protein. (311 aa)
	HCAG_06167	Protein kinase domain-containing protein. (1110 aa)
	HCAG_07256	Uncharacterized protein. (863 aa)
	HCAG_07336	TPR_REGION domain-containing protein. (628 aa)
	HCAG_07337	TPR_REGION domain-containing protein. (111 aa)
	HCAG_07774	Spc7 domain-containing protein. (1587 aa)
	HCAG_07968	Anaphase promoting complex subunit 11. (104 aa)
	HCAG_08897	HORMA domain-containing protein. (229 aa)
	HCAG_08983	SANT domain-containing protein. (188 aa)
	HCAG_09176	SANT domain-containing protein. (465 aa)
	HCAG_09159	SANT domain-containing protein. (385 aa)
	HCAG_09167	SANT domain-containing protein. (108 aa)
	HCAG_09204	SANT domain-containing protein. (465 aa)
	HCAG_09282	SANT domain-containing protein. (161 aa)
	HCAG_08368	Serine/threonine-protein phosphatase. (307 aa)
	HCAG_00015	Uncharacterized protein. (404 aa)
	HCAG_00115	Uncharacterized protein. (337 aa)
	HCAG_00216	Protein phosphatase PP2A regulatory subunit A. (613 aa)
	HCAG_00409	Uncharacterized protein. (271 aa)
	HCAG_00410	Uncharacterized protein. (730 aa)
	HCAG_00427	TPR_REGION domain-containing protein. (792 aa)
	HCAG_00450	Uncharacterized protein. (455 aa)
	HCAG_00807	Serine/threonine-protein phosphatase. (213 aa)
	HCAG_01107	DNA helicase; Belongs to the MCM family. (844 aa)
	HCAG_01177	ANAPC5 domain-containing protein. (502 aa)
	HCAG_01274	Uncharacterized protein. (1005 aa)
	HCAG_01402	Uncharacterized protein. (404 aa)
	HCAG_01409	SANT domain-containing protein. (325 aa)
	HCAG_01484	TPR_REGION domain-containing protein. (402 aa)
	HCAG_02106	SANT domain-containing protein. (470 aa)
	HCAG_02275	Uncharacterized protein. (770 aa)
	HCAG_02498	Uncharacterized protein. (433 aa)
	HCAG_02499	Uncharacterized protein. (686 aa)
	HCAG_03117	WAPL domain-containing protein. (543 aa)
	HCAG_03710	Uncharacterized protein. (394 aa)
	HCAG_03711	APC2 domain-containing protein. (175 aa)
	HCAG_03819	Uncharacterized protein. (822 aa)
	HCAG_03897	Uncharacterized protein. (483 aa)
	HCAG_04022	SANT domain-containing protein. (465 aa)
	HCAG_04052	Uncharacterized protein. (430 aa)
	HCAG_04212	Uncharacterized protein. (804 aa)
	HCAG_04266	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (398 aa)
	HCAG_04543	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (999 aa)
	HCAG_04592	C2H2-type domain-containing protein. (412 aa)
	HCAG_04841	Serine/threonine-protein phosphatase. (253 aa)
	HCAG_04908	Arb2 domain-containing protein. (198 aa)
	HCAG_04909	Hist_deacetyl domain-containing protein. (161 aa)
	HCAG_04937	Uncharacterized protein. (92 aa)
	HCAG_04938	WD_REPEATS_REGION domain-containing protein. (201 aa)
	HCAG_04983	TYR_PHOSPHATASE_2 domain-containing protein. (616 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00216	HCAG_00807	A6QS60	A6QTV1	Protein phosphatase PP2A regulatory subunit A.	Serine/threonine-protein phosphatase.	0.712
HCAG_00216	HCAG_01107	A6QS60	A6QUQ1	Protein phosphatase PP2A regulatory subunit A.	DNA helicase; Belongs to the MCM family.	0.468
HCAG_00216	HCAG_01274	A6QS60	A6QV67	Protein phosphatase PP2A regulatory subunit A.	Uncharacterized protein.	0.444
HCAG_00216	HCAG_04841	A6QS60	A6R5D3	Protein phosphatase PP2A regulatory subunit A.	Serine/threonine-protein phosphatase.	0.712
HCAG_00216	HCAG_06167	A6QS60	A6RB29	Protein phosphatase PP2A regulatory subunit A.	Protein kinase domain-containing protein.	0.617
HCAG_00216	HCAG_08368	A6QS60	A6RFF2	Protein phosphatase PP2A regulatory subunit A.	Serine/threonine-protein phosphatase.	0.907
HCAG_00216	HCAG_08897	A6QS60	A6RGY0	Protein phosphatase PP2A regulatory subunit A.	HORMA domain-containing protein.	0.747
HCAG_00409	HCAG_00410	A6QSQ3	A6QSQ4	Uncharacterized protein.	Uncharacterized protein.	0.899
HCAG_00409	HCAG_00427	A6QSQ3	A6QSS1	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.926
HCAG_00409	HCAG_01177	A6QSQ3	A6QUX1	Uncharacterized protein.	ANAPC5 domain-containing protein.	0.919
HCAG_00409	HCAG_01274	A6QSQ3	A6QV67	Uncharacterized protein.	Uncharacterized protein.	0.915
HCAG_00409	HCAG_02275	A6QSQ3	A6QY18	Uncharacterized protein.	Uncharacterized protein.	0.920
HCAG_00409	HCAG_03710	A6QSQ3	A6R252	Uncharacterized protein.	Uncharacterized protein.	0.789
HCAG_00409	HCAG_03711	A6QSQ3	A6R253	Uncharacterized protein.	APC2 domain-containing protein.	0.789
HCAG_00409	HCAG_04937	A6QSQ3	A6R5M9	Uncharacterized protein.	Uncharacterized protein.	0.615
HCAG_00409	HCAG_04938	A6QSQ3	A6R5N0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.615
HCAG_00409	HCAG_05203	A6QSQ3	A6R6E5	Uncharacterized protein.	Ubiquitin-conjugating enzyme E2-20 kDa; Belongs to the ubiquitin-conjugating enzyme family.	0.796
HCAG_00409	HCAG_05893	A6QSQ3	A6RAA5	Uncharacterized protein.	BUB1 N-terminal domain-containing protein.	0.763
HCAG_00409	HCAG_05894	A6QSQ3	A6RAA6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.763
HCAG_00409	HCAG_06167	A6QSQ3	A6RB29	Uncharacterized protein.	Protein kinase domain-containing protein.	0.638