(24 nodes) Maintenance of location network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_08059	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (186 aa)
	HCAG_00026	Uncharacterized protein. (65 aa)
	HCAG_00111	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (879 aa)
	HCAG_00191	Uncharacterized protein. (113 aa)
	HCAG_00403	Vacuolar sorting protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (681 aa)
	HCAG_01546	Uncharacterized protein. (866 aa)
	HCAG_01547	Uncharacterized protein. (1700 aa)
	HCAG_01831	GOLD domain-containing protein. (70 aa)
	HCAG_01943	FCP1 homology domain-containing protein. (163 aa)
	HCAG_01985	Uncharacterized protein. (1185 aa)
	HCAG_02484	Uncharacterized protein. (228 aa)
	HCAG_02940	PH domain-containing protein. (1556 aa)
	HCAG_02967	Uncharacterized protein. (402 aa)
	HCAG_04081	Uncharacterized protein. (454 aa)
	HCAG_04095	Uncharacterized protein. (239 aa)
	HCAG_04821	Protein phosphatases PP1 regulatory subunit sds22. (324 aa)
	HCAG_05471	Phospholipid:diacylglycerol acyltransferase. (555 aa)
	HCAG_05511	Vacuolar protein sorting-associated protein 74. (359 aa)
	HCAG_06538	Uncharacterized protein. (318 aa)
	HCAG_06921	ER lumen protein-retaining receptor. (125 aa)
	HCAG_05862	Uncharacterized protein. (990 aa)
	HCAG_06062	PX domain-containing protein. (356 aa)
	HCAG_07506	Profilin; Belongs to the profilin family. (148 aa)
	HCAG_08014	Uncharacterized protein. (610 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00111	HCAG_01546	A6QRV5	A6QVY9	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Uncharacterized protein.	0.458
HCAG_00111	HCAG_01547	A6QRV5	A6QVZ0	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Uncharacterized protein.	0.458
HCAG_00111	HCAG_06062	A6QRV5	A6RAS4	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	PX domain-containing protein.	0.981
HCAG_00191	HCAG_04081	A6QS35	A6R373	Uncharacterized protein.	Uncharacterized protein.	0.449
HCAG_00403	HCAG_02940	A6QSP7	A6QZY3	Vacuolar sorting protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	PH domain-containing protein.	0.423
HCAG_00403	HCAG_06062	A6QSP7	A6RAS4	Vacuolar sorting protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	PX domain-containing protein.	0.577
HCAG_01546	HCAG_00111	A6QVY9	A6QRV5	Uncharacterized protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.458
HCAG_01546	HCAG_01547	A6QVY9	A6QVZ0	Uncharacterized protein.	Uncharacterized protein.	0.945
HCAG_01547	HCAG_00111	A6QVZ0	A6QRV5	Uncharacterized protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.458
HCAG_01547	HCAG_01546	A6QVZ0	A6QVY9	Uncharacterized protein.	Uncharacterized protein.	0.945
HCAG_01831	HCAG_06921	A6QWS4	A6R9D0	GOLD domain-containing protein.	ER lumen protein-retaining receptor.	0.760
HCAG_01831	HCAG_08059	A6QWS4	A6REJ4	GOLD domain-containing protein.	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	0.522
HCAG_02940	HCAG_00403	A6QZY3	A6QSP7	PH domain-containing protein.	Vacuolar sorting protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.423
HCAG_04081	HCAG_00191	A6R373	A6QS35	Uncharacterized protein.	Uncharacterized protein.	0.449
HCAG_04081	HCAG_05471	A6R373	A6R763	Uncharacterized protein.	Phospholipid:diacylglycerol acyltransferase.	0.988
HCAG_05471	HCAG_04081	A6R763	A6R373	Phospholipid:diacylglycerol acyltransferase.	Uncharacterized protein.	0.988
HCAG_06062	HCAG_00111	A6RAS4	A6QRV5	PX domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.981
HCAG_06062	HCAG_00403	A6RAS4	A6QSP7	PX domain-containing protein.	Vacuolar sorting protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.577
HCAG_06538	HCAG_07506	A6R897	A6RCZ8	Uncharacterized protein.	Profilin; Belongs to the profilin family.	0.637
HCAG_06921	HCAG_01831	A6R9D0	A6QWS4	ER lumen protein-retaining receptor.	GOLD domain-containing protein.	0.760