STRINGSTRING
HCAG_06696 HCAG_06696 HCAG_06998 HCAG_06998 HCAG_05757 HCAG_05757 HCAG_05897 HCAG_05897 HCAG_05940 HCAG_05940 HCAG_06068 HCAG_06068 HCAG_02072 HCAG_02072 HCAG_01822 HCAG_01822 HCAG_01190 HCAG_01190 HCAG_00960 HCAG_00960 HCAG_04484 HCAG_04484 HCAG_05387 HCAG_05387 HCAG_05461 HCAG_05461 HCAG_05592 HCAG_05592 HCAG_06382 HCAG_06382 HCAG_06423 HCAG_06423 HCAG_06524 HCAG_06524 HCAG_06542 HCAG_06542 HCAG_06697 HCAG_06697 HCAG_06137 HCAG_06137 PAN2 PAN2 HCAG_08809 HCAG_08809 HCAG_08292 HCAG_08292 HCAG_07214 HCAG_07214 HCAG_06138 HCAG_06138 HCAG_00485 HCAG_00485 HCAG_02509 HCAG_02509 USB1 USB1 HCAG_02880 HCAG_02880 HCAG_03200 HCAG_03200 HCAG_03457 HCAG_03457 HCAG_04444 HCAG_04444
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HCAG_06696CCHC-type domain-containing protein. (475 aa)
HCAG_06998Uncharacterized protein. (381 aa)
HCAG_05757Endo/exonuclease/phosphatase domain-containing protein. (330 aa)
HCAG_05897Uncharacterized protein. (373 aa)
HCAG_05940RNase_PH domain-containing protein. (337 aa)
HCAG_06068Endo/exonuclease/phosphatase domain-containing protein. (769 aa)
HCAG_02072Ribosome biogenesis protein BRX1. (383 aa)
HCAG_01822RNB domain-containing protein. (1344 aa)
HCAG_01190Uncharacterized protein. (249 aa)
HCAG_00960Uncharacterized protein. (636 aa)
HCAG_04484RNase_PH domain-containing protein. (291 aa)
HCAG_05387KH_dom_type_1 domain-containing protein. (279 aa)
HCAG_05461HRDC domain-containing protein. (807 aa)
HCAG_05592ATP-dependent RNA helicase DOB1. (1081 aa)
HCAG_063823'-5' exonuclease domain-containing protein. (808 aa)
HCAG_06423Sec2p domain-containing protein. (252 aa)
HCAG_06524Endo/exonuclease/phosphatase domain-containing protein. (301 aa)
HCAG_06542Uncharacterized protein. (421 aa)
HCAG_06697Uncharacterized protein. (232 aa)
HCAG_06137Mitotic control protein dis3. (236 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1163 aa)
HCAG_08809Exonuclease domain-containing protein. (189 aa)
HCAG_08292Exonuclease domain-containing protein. (805 aa)
HCAG_07214Uncharacterized protein. (252 aa)
HCAG_06138Mitotic control protein dis3. (459 aa)
HCAG_004855'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1327 aa)
HCAG_02509Uncharacterized protein. (289 aa)
USB1U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (311 aa)
HCAG_02880CCR4-NOT transcription complex subunit 7. (444 aa)
HCAG_03200RNase_PH domain-containing protein. (440 aa)
HCAG_03457ECR1_N domain-containing protein. (372 aa)
HCAG_04444RNB domain-containing protein. (909 aa)
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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