(5 nodes) Ribosome-associated ubiquitin-dependent protein catabolic process network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_07031	WD_REPEATS_REGION domain-containing protein. (316 aa)
	HCAG_02080	Uncharacterized protein. (361 aa)
	HCAG_03690	Uncharacterized protein. (1177 aa)
	HCAG_05535	Uncharacterized protein. (715 aa)
	HCAG_06716	Uncharacterized protein. (676 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_02080	HCAG_03690	A6QXH3	A6R232	Uncharacterized protein.	Uncharacterized protein.	0.624
HCAG_02080	HCAG_05535	A6QXH3	A6R7C7	Uncharacterized protein.	Uncharacterized protein.	0.597
HCAG_02080	HCAG_06716	A6QXH3	A6R8S5	Uncharacterized protein.	Uncharacterized protein.	0.447
HCAG_03690	HCAG_02080	A6R232	A6QXH3	Uncharacterized protein.	Uncharacterized protein.	0.624
HCAG_03690	HCAG_05535	A6R232	A6R7C7	Uncharacterized protein.	Uncharacterized protein.	0.706
HCAG_03690	HCAG_06716	A6R232	A6R8S5	Uncharacterized protein.	Uncharacterized protein.	0.949
HCAG_05535	HCAG_02080	A6R7C7	A6QXH3	Uncharacterized protein.	Uncharacterized protein.	0.597
HCAG_05535	HCAG_03690	A6R7C7	A6R232	Uncharacterized protein.	Uncharacterized protein.	0.706
HCAG_05535	HCAG_06716	A6R7C7	A6R8S5	Uncharacterized protein.	Uncharacterized protein.	0.720
HCAG_06716	HCAG_02080	A6R8S5	A6QXH3	Uncharacterized protein.	Uncharacterized protein.	0.447
HCAG_06716	HCAG_03690	A6R8S5	A6R232	Uncharacterized protein.	Uncharacterized protein.	0.949
HCAG_06716	HCAG_05535	A6R8S5	A6R7C7	Uncharacterized protein.	Uncharacterized protein.	0.720