(24 nodes) Mitochondrial small ribosomal subunit network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_08235	40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family. (312 aa)
	HCAG_08204	Uncharacterized protein. (255 aa)
	HCAG_04749	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated. (415 aa)
	HCAG_05379	Uncharacterized protein. (113 aa)
	HCAG_05505	Uncharacterized protein. (424 aa)
	RSM25	37S ribosomal protein S25, mitochondrial. (277 aa)
	HCAG_06367	Uncharacterized protein. (503 aa)
	HCAG_06812	Uncharacterized protein. (321 aa)
	HCAG_06907	Ribosomal_S10 domain-containing protein. (261 aa)
	HCAG_06917	Uncharacterized protein. (107 aa)
	HCAG_00733	Uncharacterized protein. (396 aa)
	HCAG_00858	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (144 aa)
	HCAG_00850	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (418 aa)
	HCAG_00952	Uncharacterized protein. (208 aa)
	HCAG_01362	S4 RNA-binding domain-containing protein. (453 aa)
	HCAG_01442	Uncharacterized protein. (168 aa)
	HCAG_02915	Arf-GAP domain-containing protein. (382 aa)
	HCAG_03471	Uncharacterized protein. (158 aa)
	HCAG_03647	Uncharacterized protein. (191 aa)
	HCAG_04214	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (92 aa)
	HCAG_06035	Ribosomal_S7 domain-containing protein. (419 aa)
	HCAG_07055	MRP-S28 domain-containing protein. (225 aa)
	HCAG_07782	Uncharacterized protein. (169 aa)
	HCAG_07812	Uncharacterized protein. (355 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00733	HCAG_00850	A6QTM7	A6QTZ4	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.942
HCAG_00733	HCAG_00858	A6QTM7	A6QU02	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.878
HCAG_00733	HCAG_00952	A6QTM7	A6QU96	Uncharacterized protein.	Uncharacterized protein.	0.911
HCAG_00733	HCAG_01362	A6QTM7	A6QVF5	Uncharacterized protein.	S4 RNA-binding domain-containing protein.	0.960
HCAG_00733	HCAG_01442	A6QTM7	A6QVN5	Uncharacterized protein.	Uncharacterized protein.	0.898
HCAG_00733	HCAG_02915	A6QTM7	A6QZV8	Uncharacterized protein.	Arf-GAP domain-containing protein.	0.593
HCAG_00733	HCAG_03471	A6QTM7	A6R1G4	Uncharacterized protein.	Uncharacterized protein.	0.684
HCAG_00733	HCAG_03647	A6QTM7	A6R1Y9	Uncharacterized protein.	Uncharacterized protein.	0.915
HCAG_00733	HCAG_04214	A6QTM7	A6R3K6	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.868
HCAG_00733	HCAG_05379	A6QTM7	A6R6X1	Uncharacterized protein.	Uncharacterized protein.	0.876
HCAG_00733	HCAG_05505	A6QTM7	A6R797	Uncharacterized protein.	Uncharacterized protein.	0.890
HCAG_00733	HCAG_06035	A6QTM7	A6RAP7	Uncharacterized protein.	Ribosomal_S7 domain-containing protein.	0.895
HCAG_00733	HCAG_06367	A6QTM7	A6R7S6	Uncharacterized protein.	Uncharacterized protein.	0.906
HCAG_00733	HCAG_06812	A6QTM7	A6R921	Uncharacterized protein.	Uncharacterized protein.	0.895
HCAG_00733	HCAG_06907	A6QTM7	A6R9B6	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.867
HCAG_00733	HCAG_06917	A6QTM7	A6R9C6	Uncharacterized protein.	Uncharacterized protein.	0.871
HCAG_00733	HCAG_07055	A6QTM7	A6RBP7	Uncharacterized protein.	MRP-S28 domain-containing protein.	0.914
HCAG_00733	HCAG_07782	A6QTM7	A6RDS4	Uncharacterized protein.	Uncharacterized protein.	0.890
HCAG_00733	HCAG_07812	A6QTM7	A6RDV4	Uncharacterized protein.	Uncharacterized protein.	0.884
HCAG_00733	HCAG_08204	A6QTM7	A6REY9	Uncharacterized protein.	Uncharacterized protein.	0.709