STRINGSTRING
HCAG_03306 HCAG_03306 HCAG_08381 HCAG_08381 HCAG_07796 HCAG_07796 HCAG_07565 HCAG_07565 HCAG_03365 HCAG_03365 HCAG_03763 HCAG_03763 HCAG_04558 HCAG_04558 HCAG_00458 HCAG_00458 HCAG_00813 HCAG_00813 HCAG_03604 HCAG_03604 HCAG_02641 HCAG_02641
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HCAG_03306Peptidyl-prolyl cis-trans isomerase cypE. (629 aa)
HCAG_08381Pre-mRNA splicing factor CWC2. (365 aa)
HCAG_07796WD_REPEATS_REGION domain-containing protein. (583 aa)
HCAG_07565Pre-mRNA splicing factor slt-11. (405 aa)
HCAG_03365Uncharacterized protein. (88 aa)
HCAG_03763RRM domain-containing protein. (154 aa)
HCAG_04558Uncharacterized protein. (560 aa)
HCAG_00458WD_REPEATS_REGION domain-containing protein. (348 aa)
HCAG_00813116 kDa U5 small nuclear ribonucleoprotein component. (899 aa)
HCAG_03604Uncharacterized protein. (285 aa)
HCAG_02641Pre-mRNA splicing factor syf-1. (831 aa)
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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